Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PPP1R2P5-201ENST00000457256 603 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.69□□□□□ -2.14
RFX4Q33E94 GMFBP1-201ENST00000467831 427 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 RPS3AP17-201ENST00000472594 777 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.69□□□□□ -2.14
RFX4Q33E94 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.69□□□□□ -2.14
RFX4Q33E94 AC105417.1-201ENST00000514691 285 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 SNORA48.11-201ENST00000517015 89 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.69□□□□□ -2.14
RFX4Q33E94 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.69□□□□□ -2.14
RFX4Q33E94 HIF1AP1-201ENST00000553642 175 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 MTCO3P23-201ENST00000561363 289 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.69□□□□□ -2.14
RFX4Q33E94 AC078795.2-201ENST00000602835 1252 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.69□□□□□ -2.14
RFX4Q33E94 AC005296.1-201ENST00000616145 209 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 AC092881.1-201ENST00000638218 2733 ntBASIC1.69□□□□□ -2.14
RFX4Q33E94 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RFX4Q33E94 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
RFX4Q33E94 RNU6-1274P-201ENST00000384557 107 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 Y_RNA.582-201ENST00000391023 95 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 RNU2-29P-201ENST00000410423 189 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 BTF3L4P1-201ENST00000413813 468 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.68□□□□□ -2.14
RFX4Q33E94 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.68□□□□□ -2.14
RFX4Q33E94 AL353752.1-201ENST00000454946 260 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 AC006026.2-201ENST00000457376 180 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 CYP2C59P-201ENST00000457790 269 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 RNU7-180P-201ENST00000459240 63 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 snoU13.14-201ENST00000459372 104 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 RPL21P99-201ENST00000480369 423 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 AC079382.1-201ENST00000493346 557 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 CKS1BP2-201ENST00000497342 240 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 HMGB1P29-201ENST00000505659 499 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 LRRC34P2-201ENST00000514850 553 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 RNA5SP137-201ENST00000516833 135 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.68□□□□□ -2.14
RFX4Q33E94 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RFX4Q33E94 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.68□□□□□ -2.14
RFX4Q33E94 AC023050.3-201ENST00000541142 333 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.68□□□□□ -2.14
RFX4Q33E94 AC091544.4-201ENST00000555268 342 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.68□□□□□ -2.14
RFX4Q33E94 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.68□□□□□ -2.14
RFX4Q33E94 PIGPP4-201ENST00000584447 307 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.68□□□□□ -2.14
RFX4Q33E94 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
RFX4Q33E94 AC005609.4-201ENST00000625071 447 ntBASIC1.68□□□□□ -2.14
RFX4Q33E94 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.67□□□□□ -2.14
RFX4Q33E94 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.67□□□□□ -2.14
RFX4Q33E94 Y_RNA.1-201ENST00000352915 104 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 RNU6-212P-201ENST00000362642 104 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 RNU6-655P-201ENST00000362858 107 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 RNU6-105P-201ENST00000363909 104 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 SNORA25B-201ENST00000365507 128 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 RNU5A-6P-201ENST00000384136 116 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 RNU6-434P-201ENST00000384376 107 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 RNU2-48P-201ENST00000410694 191 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 SNORD56-201ENST00000413522 71 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.67□□□□□ -2.14
RFX4Q33E94 USP9YP14-201ENST00000430663 563 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AC002486.1-201ENST00000435098 391 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AC009238.1-201ENST00000442165 424 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.67□□□□□ -2.14
RFX4Q33E94 AC009237.6-201ENST00000446969 424 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 MTND1P29-201ENST00000448112 647 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AC087884.1-201ENST00000469738 328 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.67□□□□□ -2.14
RFX4Q33E94 RPL38P4-201ENST00000502376 214 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 CCDC34P1-201ENST00000507441 517 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 SNORA4.4-201ENST00000515921 135 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 HSPE1P18-201ENST00000517602 280 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AL137161.1-201ENST00000532231 390 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.67□□□□□ -2.14
RFX4Q33E94 Z82243.1-201ENST00000609432 473 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AC007684.1-201ENST00000609671 477 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.67□□□□□ -2.14
RFX4Q33E94 AC104073.3-201ENST00000610942 955 ntBASIC1.67□□□□□ -2.14
RFX4Q33E94 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RFX4Q33E94 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
RFX4Q33E94 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU6-428P-201ENST00000362942 107 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU6-1210P-201ENST00000363775 107 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU6-944P-201ENST00000364023 107 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU6-266P-201ENST00000364225 107 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU6-336P-201ENST00000364891 107 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 Y_RNA.296-201ENST00000364930 108 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 RNA5SP240-201ENST00000365355 128 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU6-996P-201ENST00000365438 107 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
RFX4Q33E94 SNORA70B-201ENST00000384210 135 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU6-517P-201ENST00000384362 110 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RFX4Q33E94 RNA5SP450-201ENST00000411206 102 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.66□□□□□ -2.14
RFX4Q33E94 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.66□□□□□ -2.14
RFX4Q33E94 AL606489.2-201ENST00000433886 234 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.66□□□□□ -2.14
RFX4Q33E94 DNAJC19P4-201ENST00000440115 345 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms