Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN1Q16799 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN1Q16799 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTN1Q16799 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN1Q16799 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 MTND5P35-201ENST00000557537 1720 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
RTN1Q16799 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTN1Q16799 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RTN1Q16799 RNU4-80P-201ENST00000363200 141 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 RNU4-56P-201ENST00000364700 142 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 RNA5SP189-201ENST00000364920 115 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 SNORA3.3-201ENST00000408712 125 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 RNU6-735P-201ENST00000410612 107 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 OOSP1P1-201ENST00000423265 274 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 AC012306.1-201ENST00000423267 114 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.44□□□□□ -1.7
RTN1Q16799 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.44□□□□□ -1.7
RTN1Q16799 SNORA71B-202ENST00000439232 272 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 RPL39P29-201ENST00000447779 157 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 RPL26P9-201ENST00000457466 433 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 RNA5SP468-201ENST00000516782 93 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 CYCSP23-201ENST00000519781 313 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 NACAP3-201ENST00000552100 481 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.44□□□□□ -1.7
RTN1Q16799 AC108706.1-201ENST00000611053 297 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 MIR4727-201ENST00000622232 55 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTN1Q16799 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTN1Q16799 ADAM3A-203ENST00000461344 2157 ntBASIC4.44□□□□□ -1.7
RTN1Q16799 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.44□□□□□ -1.7
RTN1Q16799 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTN1Q16799 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTN1Q16799 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTN1Q16799 AC110491.1-201ENST00000562191 2010 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTN1Q16799 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTN1Q16799 RNU6-1285P-201ENST00000363480 105 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 Y_RNA.179-201ENST00000363844 90 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 U3.39-201ENST00000408569 239 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 RPS26P42-201ENST00000413485 326 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 RPL30P12-201ENST00000474666 353 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 RPS29P20-201ENST00000489592 171 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 TRBV12-2-201ENST00000489763 344 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 AC005921.1-201ENST00000510589 286 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.43□□□□□ -1.7
RTN1Q16799 AC074133.1-201ENST00000515696 183 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 RNA5SP164-201ENST00000516533 110 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.43□□□□□ -1.7
RTN1Q16799 AC018448.1-201ENST00000552843 316 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 AC087499.8-201ENST00000578406 226 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 MIR3145-201ENST00000580727 82 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 AC092628.2-201ENST00000622492 339 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 AC092593.1-201ENST00000515413 1815 ntBASIC4.43□□□□□ -1.7
RTN1Q16799 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.43□□□□□ -1.7
RTN1Q16799 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTN1Q16799 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTN1Q16799 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.42□□□□□ -1.7
RTN1Q16799 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RTN1Q16799 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
RTN1Q16799 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN1Q16799 Y_RNA.498-201ENST00000384460 102 ntBASIC4.42□□□□□ -1.7
RTN1Q16799 SNORA57.1-201ENST00000391227 145 ntBASIC4.42□□□□□ -1.7
RTN1Q16799 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN1Q16799 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.42□□□□□ -1.7
RTN1Q16799 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN1Q16799 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.42□□□□□ -1.7
RTN1Q16799 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.42□□□□□ -1.7
RTN1Q16799 AC108043.1-201ENST00000512696 574 ntBASIC4.42□□□□□ -1.7
RTN1Q16799 RNU5F-8P-201ENST00000515941 111 ntBASIC4.42□□□□□ -1.7
RTN1Q16799 MIR5685-201ENST00000579080 79 ntBASIC4.42□□□□□ -1.7
RTN1Q16799 SNORA62.6-201ENST00000606322 83 ntBASIC4.42□□□□□ -1.7
RTN1Q16799 USP8P1-201ENST00000494673 3183 ntBASIC4.42□□□□□ -1.7
RTN1Q16799 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.42□□□□□ -1.7
RTN1Q16799 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RTN1Q16799 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.41□□□□□ -1.7
RTN1Q16799 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.41□□□□□ -1.7
RTN1Q16799 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTN1Q16799 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN1Q16799 RNU6-81P-201ENST00000365608 104 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 RNU6-211P-201ENST00000384047 107 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 SNORA26.3-201ENST00000391119 136 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 AL357139.1-201ENST00000407792 426 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 AC019205.3-201ENST00000424573 156 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTN1Q16799 RN7SL132P-201ENST00000478131 296 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 RNU6-191P-201ENST00000516295 94 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 RNU6-966P-201ENST00000516479 104 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 RNU6-928P-201ENST00000516876 104 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTN1Q16799 MIR5692C2-201ENST00000577959 77 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 snoU18.1-201ENST00000629629 71 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RTN1Q16799 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.41□□□□□ -1.7
RTN1Q16799 RBBP8P1-201ENST00000449447 1844 ntBASIC4.41□□□□□ -1.7
RTN1Q16799 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RTN1Q16799 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.41□□□□□ -1.7
RTN1Q16799 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RTN1Q16799 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RTN1Q16799 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms