Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 RPL23AP78-201ENST00000599928 470 ntBASIC3.74□□□□□ -1.81
VPS72Q15906 RNU6-85P-201ENST00000605989 107 ntBASIC3.74□□□□□ -1.81
VPS72Q15906 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.74□□□□□ -1.81
VPS72Q15906 AC138305.3-201ENST00000624988 240 ntBASIC3.74□□□□□ -1.81
VPS72Q15906 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS72Q15906 AC099654.7-201ENST00000635788 2127 ntBASIC3.74□□□□□ -1.81
VPS72Q15906 AP006437.1-201ENST00000641440 3685 ntBASIC3.74□□□□□ -1.81
VPS72Q15906 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS72Q15906 RNU6-1329P-201ENST00000365664 107 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 Y_RNA.496-201ENST00000384444 101 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 Y_RNA.527-201ENST00000384573 102 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 RNU6-482P-201ENST00000391068 107 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 MIR548F4-201ENST00000408515 105 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 RPS15AP5-201ENST00000436276 388 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 GSTA11P-201ENST00000452866 669 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 AC022493.2-201ENST00000506122 481 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 AC104576.1-201ENST00000524225 88 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS72Q15906 AC008269.2-201ENST00000561915 1105 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 AC025281.1-201ENST00000567026 265 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 AC006006.1-201ENST00000603082 144 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS72Q15906 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS72Q15906 AL162373.1-201ENST00000620433 407 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 UCA1.1-201ENST00000620952 75 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 MIR3199-2-201ENST00000636243 86 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS72Q15906 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
VPS72Q15906 AC009487.2-201ENST00000420969 6821 ntBASIC3.73□□□□□ -1.81
VPS72Q15906 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS72Q15906 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS72Q15906 Y_RNA.151-201ENST00000363566 112 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 Y_RNA.238-201ENST00000364441 102 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 SNORD73A-201ENST00000386062 65 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS72Q15906 AC008267.5-201ENST00000424928 265 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 MTCYBP9-201ENST00000431021 303 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 AC139453.3-201ENST00000493276 369 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS72Q15906 LRRC37A5P-203ENST00000580181 585 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS72Q15906 AC008739.2-201ENST00000597006 317 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 AL591516.1-201ENST00000611326 274 ntBASIC3.72□□□□□ -1.81
VPS72Q15906 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS72Q15906 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS72Q15906 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS72Q15906 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
VPS72Q15906 ADAM3A-203ENST00000461344 2157 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 RNU6-842P-201ENST00000384269 107 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 Y_RNA.557-201ENST00000384680 107 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 MIR517A-201ENST00000385001 87 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 RNU6-607P-201ENST00000411283 108 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 CYCSP33-201ENST00000414485 327 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 Z98742.3-201ENST00000418637 326 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 AC243428.1-201ENST00000421099 264 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 RPL23AP50-201ENST00000434149 455 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS72Q15906 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS72Q15906 AC096725.1-201ENST00000514266 313 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 MTCO2P24-201ENST00000515611 426 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.71□□□□□ -1.82
VPS72Q15906 AC023442.1-201ENST00000531247 422 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS72Q15906 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.71□□□□□ -1.82
VPS72Q15906 MIR3149-201ENST00000584629 83 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS72Q15906 CTSLP2-204ENST00000629029 392 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 CDC27P3-201ENST00000635418 1910 ntBASIC3.71□□□□□ -1.82
VPS72Q15906 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VPS72Q15906 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
VPS72Q15906 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS72Q15906 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS72Q15906 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS72Q15906 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS72Q15906 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS72Q15906 Y_RNA.428-201ENST00000384078 102 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 RNU6-1179P-201ENST00000384667 107 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 RNU2-3P-201ENST00000410144 191 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 AL353621.1-201ENST00000418219 243 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 AL365496.1-201ENST00000426885 215 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 AL591806.2-201ENST00000433122 173 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS72Q15906 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS72Q15906 AC018437.1-201ENST00000492214 406 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 AC015911.1-201ENST00000495111 156 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS72Q15906 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS72Q15906 AC008716.1-201ENST00000511084 513 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 SNORD116.3-201ENST00000517176 78 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS72Q15906 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS72Q15906 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS72Q15906 OR1M4P-201ENST00000589199 287 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 AC025754.2-201ENST00000606491 432 ntBASIC3.7□□□□□ -1.82
VPS72Q15906 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS72Q15906 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS72Q15906 GABRG2-229ENST00000641017 3628 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 SNORD21-201ENST00000383953 95 ntBASIC3.69□□□□□ -1.82
VPS72Q15906 RNU2-49P-201ENST00000410666 184 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms