Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PTMAP5-201ENST00000393073 333 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 EI24P2-201ENST00000397776 1076 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH1Q08174 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH1Q08174 AC025554.1-201ENST00000505641 188 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH1Q08174 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH1Q08174 RNU6-155P-201ENST00000516347 100 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDH1Q08174 HIGD1AP1-201ENST00000550979 275 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 MIR3653-201ENST00000625572 110 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDH1Q08174 MIR3199-2-201ENST00000636243 86 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDH1Q08174 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH1Q08174 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH1Q08174 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDH1Q08174 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PCDH1Q08174 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH1Q08174 AC002543.1-201ENST00000299783 1954 ntBASIC4□□□□□ -1.77
PCDH1Q08174 RNU1-64P-201ENST00000365443 163 ntBASIC4□□□□□ -1.77
PCDH1Q08174 RNU6-1310P-201ENST00000384153 107 ntBASIC4□□□□□ -1.77
PCDH1Q08174 RNU6-1199P-201ENST00000411249 104 ntBASIC4□□□□□ -1.77
PCDH1Q08174 RPL23AP46-201ENST00000438548 490 ntBASIC4□□□□□ -1.77
PCDH1Q08174 IFNA11P-201ENST00000446352 526 ntBASIC4□□□□□ -1.77
PCDH1Q08174 AC006445.2-201ENST00000510061 472 ntBASIC4□□□□□ -1.77
PCDH1Q08174 HMGB3P3-201ENST00000510526 400 ntBASIC4□□□□□ -1.77
PCDH1Q08174 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH1Q08174 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
PCDH1Q08174 CYP4A27P-201ENST00000567218 190 ntBASIC4□□□□□ -1.77
PCDH1Q08174 AL020997.2-201ENST00000602607 184 ntBASIC4□□□□□ -1.77
PCDH1Q08174 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4□□□□□ -1.77
PCDH1Q08174 AC011944.2-201ENST00000624440 683 ntBASIC4□□□□□ -1.77
PCDH1Q08174 SNORD98-201ENST00000636377 67 ntBASIC4□□□□□ -1.77
PCDH1Q08174 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4□□□□□ -1.77
PCDH1Q08174 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PCDH1Q08174 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH1Q08174 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4□□□□□ -1.77
PCDH1Q08174 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PCDH1Q08174 SPATA31D2P-201ENST00000429999 4388 ntBASIC4□□□□□ -1.77
PCDH1Q08174 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PCDH1Q08174 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4□□□□□ -1.77
PCDH1Q08174 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH1Q08174 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH1Q08174 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH1Q08174 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDH1Q08174 AC106871.1-201ENST00000568324 3102 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 RNU6-1272P-201ENST00000362776 107 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PCDH1Q08174 SNORA40.19-201ENST00000390846 128 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 RNU2-54P-201ENST00000410299 190 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 RNA5SP306-201ENST00000411087 107 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 RNU5E-9P-201ENST00000411164 104 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH1Q08174 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH1Q08174 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDH1Q08174 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDH1Q08174 MIR3136-201ENST00000583498 78 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 IPO5P1-202ENST00000600039 287 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 DEFB117-201ENST00000602356 141 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 AC083809.1-201ENST00000615051 472 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 uc_338.32-201ENST00000615087 172 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 AC114781.5-201ENST00000615297 108 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 MIR8059-201ENST00000620427 81 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 MTND1P7-201ENST00000632801 297 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH1Q08174 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.99□□□□□ -1.77
PCDH1Q08174 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
PCDH1Q08174 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDH1Q08174 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDH1Q08174 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH1Q08174 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDH1Q08174 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
PCDH1Q08174 CUL1P1-201ENST00000509510 2425 ntBASIC3.99□□□□□ -1.77
PCDH1Q08174 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH1Q08174 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH1Q08174 AL133383.2-201ENST00000622958 2336 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH1Q08174 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDH1Q08174 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH1Q08174 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
PCDH1Q08174 RNU1-62P-201ENST00000362599 164 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 Y_RNA.571-201ENST00000384753 98 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 RNU6-1248P-201ENST00000391096 64 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 U3.26-201ENST00000391236 204 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 MIR208B-201ENST00000401172 77 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 RN7SKP53-201ENST00000411337 315 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 BMS1P22-201ENST00000414726 313 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDH1Q08174 AL591419.1-201ENST00000427423 339 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDH1Q08174 RPS15AP5-201ENST00000436276 388 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 AL161651.1-201ENST00000440882 223 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 AC006011.1-201ENST00000442758 349 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDH1Q08174 RNA5SP310-201ENST00000459084 116 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms