Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC105185.1-201ENST00000518705 535 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC-0.64□□□□□ -2.51
TFF3Q07654 AC092447.9-201ENST00000603395 144 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AC112187.2-201ENST00000604345 283 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AP005212.4-201ENST00000614206 710 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AL078595.3-201ENST00000623815 1166 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 AL157786.1-207ENST00000627771 695 ntBASIC-0.64□□□□□ -2.51
TFF3Q07654 ZNF849P-201ENST00000594711 1566 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 CASC19-280ENST00000642102 1351 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 SNORD14C-201ENST00000365382 88 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 RNA5SP109-201ENST00000391010 116 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 RNA5SP222-201ENST00000411039 105 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.65□□□□□ -2.51
TFF3Q07654 AL162395.1-201ENST00000457882 422 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 AC016925.1-201ENST00000458303 298 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 RNA5SP269-201ENST00000459032 137 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 SNORD4A-201ENST00000459174 72 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 snoU13.21-201ENST00000459368 105 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 AP002371.1-201ENST00000463604 433 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 RPL36AP48-201ENST00000485521 314 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.65□□□□□ -2.51
TFF3Q07654 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.65□□□□□ -2.51
TFF3Q07654 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 AL133370.2-201ENST00000619934 439 ntBASIC-0.65□□□□□ -2.51
TFF3Q07654 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.65□□□□□ -2.51
TFF3Q07654 SNORA1.1-201ENST00000364671 133 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 RNU6-741P-201ENST00000383889 107 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 AL355796.1-201ENST00000406706 323 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 SNORD75.1-201ENST00000408373 60 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 RNU4-63P-201ENST00000411313 118 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 RNA5SP111-201ENST00000411386 101 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.66□□□□□ -2.52
TFF3Q07654 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.66□□□□□ -2.52
TFF3Q07654 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.66□□□□□ -2.52
TFF3Q07654 BRK1P2-201ENST00000442875 223 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 AC022616.2-201ENST00000523185 300 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 AC016256.1-201ENST00000547971 354 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 AC025449.1-201ENST00000603896 529 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 AC097065.2-201ENST00000608159 533 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.66□□□□□ -2.52
TFF3Q07654 RNU6-140P-201ENST00000384566 108 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 RNU6-747P-201ENST00000390928 104 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 RNU6-241P-201ENST00000391148 104 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-0.67□□□□□ -2.52
TFF3Q07654 RPS20P24-201ENST00000457473 361 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.67□□□□□ -2.52
TFF3Q07654 AC113398.2-201ENST00000507630 558 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 RNU6-138P-201ENST00000515952 107 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 RNU6-319P-201ENST00000516025 108 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 RNA5SP481-201ENST00000516814 122 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 SNORA76.2-201ENST00000517095 137 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 IGKV1-22-201ENST00000524313 326 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
TFF3Q07654 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
TFF3Q07654 AL357094.1-201ENST00000603845 844 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 AC007363.1-201ENST00000604736 620 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 AC064807.4-201ENST00000607201 407 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 FTX_2.1-201ENST00000618816 94 ntBASIC-0.67□□□□□ -2.52
TFF3Q07654 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
TFF3Q07654 RNA5SP493-201ENST00000364115 91 ntBASIC-0.68□□□□□ -2.52
TFF3Q07654 MIR520A-201ENST00000384862 85 ntBASIC-0.68□□□□□ -2.52
TFF3Q07654 MIR1302-8-201ENST00000408342 128 ntBASIC-0.68□□□□□ -2.52
TFF3Q07654 RNA5SP266-201ENST00000410273 108 ntBASIC-0.68□□□□□ -2.52
TFF3Q07654 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.68□□□□□ -2.52
TFF3Q07654 MTCO3P2-201ENST00000457365 171 ntBASIC-0.68□□□□□ -2.52
TFF3Q07654 RPL39P38-201ENST00000467018 153 ntBASIC-0.68□□□□□ -2.52
TFF3Q07654 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.68□□□□□ -2.52
TFF3Q07654 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.68□□□□□ -2.52
TFF3Q07654 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.68□□□□□ -2.52
TFF3Q07654 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.68□□□□□ -2.52
TFF3Q07654 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.68□□□□□ -2.52
TFF3Q07654 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.69□□□□□ -2.52
TFF3Q07654 MED13P1-201ENST00000428342 171 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 MTATP6P16-201ENST00000434543 526 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 RPL26P6-201ENST00000440913 438 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 RPL7P55-201ENST00000450522 746 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 HMGB1P30-201ENST00000492455 606 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 AC106038.2-201ENST00000520706 568 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 AL132657.2-201ENST00000564417 358 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 AC011195.1-201ENST00000578177 177 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 MIR4743-201ENST00000584576 69 ntBASIC-0.69□□□□□ -2.52
TFF3Q07654 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.69□□□□□ -2.52
TFF3Q07654 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.7□□□□□ -2.52
TFF3Q07654 MIR635-201ENST00000384830 98 ntBASIC-0.7□□□□□ -2.52
TFF3Q07654 RNU6-575P-201ENST00000411326 105 ntBASIC-0.7□□□□□ -2.52
TFF3Q07654 AC007435.1-201ENST00000421086 415 ntBASIC-0.7□□□□□ -2.52
TFF3Q07654 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.7□□□□□ -2.52
TFF3Q07654 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-0.7□□□□□ -2.52
TFF3Q07654 RNU7-21P-201ENST00000459430 62 ntBASIC-0.7□□□□□ -2.52
TFF3Q07654 RNU6-586P-201ENST00000517265 104 ntBASIC-0.7□□□□□ -2.52
TFF3Q07654 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.7□□□□□ -2.52
TFF3Q07654 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.7□□□□□ -2.52
TFF3Q07654 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.7□□□□□ -2.52
TFF3Q07654 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms