Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 AL158211.1-201ENST00000566763 763 ntBASIC1.93□□□□□ -2.1
GABPB1Q06547 AC103987.3-201ENST00000582071 292 ntBASIC1.93□□□□□ -2.1
GABPB1Q06547 VN1R107P-201ENST00000601784 209 ntBASIC1.93□□□□□ -2.1
GABPB1Q06547 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
GABPB1Q06547 AC018889.1-201ENST00000605372 397 ntBASIC1.93□□□□□ -2.1
GABPB1Q06547 AP001596.2-201ENST00000608410 312 ntBASIC1.93□□□□□ -2.1
GABPB1Q06547 AC063943.3-201ENST00000615562 356 ntBASIC1.93□□□□□ -2.1
GABPB1Q06547 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.93□□□□□ -2.1
GABPB1Q06547 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
GABPB1Q06547 U3.12-201ENST00000364498 214 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 RNU4-42P-201ENST00000364738 142 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 Y_RNA.399-201ENST00000383955 105 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 RNU6-517P-201ENST00000384362 110 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 SNORA8-201ENST00000384574 139 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 RNU6-903P-201ENST00000391270 109 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 MIR1262-201ENST00000408276 93 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.92□□□□□ -2.1
GABPB1Q06547 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPB1Q06547 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPB1Q06547 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.92□□□□□ -2.1
GABPB1Q06547 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPB1Q06547 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GABPB1Q06547 AC026407.1-201ENST00000518369 204 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GABPB1Q06547 COPS8P3-201ENST00000526024 482 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 AL137161.1-201ENST00000532231 390 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 AL356057.1-201ENST00000533798 831 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.92□□□□□ -2.1
GABPB1Q06547 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.92□□□□□ -2.1
GABPB1Q06547 AC123912.5-201ENST00000605470 343 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GABPB1Q06547 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
GABPB1Q06547 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GABPB1Q06547 AC136475.10-201ENST00000620253 385 ntBASIC1.92□□□□□ -2.1
GABPB1Q06547 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GABPB1Q06547 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
GABPB1Q06547 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.92□□□□□ -2.1
GABPB1Q06547 ELL2P3-201ENST00000457883 1602 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
GABPB1Q06547 SNORD115-3-201ENST00000363100 82 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 Y_RNA.159-201ENST00000363674 87 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 RNU6-336P-201ENST00000364891 107 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 RNU5A-6P-201ENST00000384136 116 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 SNORA75-201ENST00000384158 137 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 RNA5SP212-201ENST00000391223 107 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AF228730.1-201ENST00000397972 663 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.91□□□□□ -2.1
GABPB1Q06547 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.91□□□□□ -2.1
GABPB1Q06547 MTCO2P34-201ENST00000421994 607 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 MTND1P26-201ENST00000440488 538 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.91□□□□□ -2.1
GABPB1Q06547 AL360221.1-201ENST00000445989 335 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.91□□□□□ -2.1
GABPB1Q06547 MTND3P5-201ENST00000512798 333 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AC069113.1-201ENST00000517763 267 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AC022880.1-201ENST00000534017 973 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.91□□□□□ -2.1
GABPB1Q06547 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AC008752.3-201ENST00000588113 712 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AC002044.1-201ENST00000606707 158 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.91□□□□□ -2.1
GABPB1Q06547 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 CTSLP2-204ENST00000629029 392 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 AC243829.7-201ENST00000633081 225 ntBASIC1.91□□□□□ -2.1
GABPB1Q06547 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
GABPB1Q06547 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.9□□□□□ -2.1
GABPB1Q06547 RNU6-552P-201ENST00000362869 119 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 RNU6-428P-201ENST00000362942 107 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 RNU6-1141P-201ENST00000364520 107 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 RNU6-1103P-201ENST00000384150 107 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 SNORD14D-201ENST00000384390 87 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 RNA5SP465-201ENST00000391195 109 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 BTF3L4P2-201ENST00000392798 346 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 RPS29P13-201ENST00000402041 169 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.9□□□□□ -2.11
GABPB1Q06547 MTND2P29-201ENST00000438595 412 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.9□□□□□ -2.11
GABPB1Q06547 TRBV12-1-201ENST00000479785 344 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AC096745.1-201ENST00000509945 370 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AC009646.1-201ENST00000510455 318 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AC010486.3-201ENST00000511602 785 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.9□□□□□ -2.11
GABPB1Q06547 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.9□□□□□ -2.11
GABPB1Q06547 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.9□□□□□ -2.11
GABPB1Q06547 AC007375.1-201ENST00000554513 578 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AGGF1P4-201ENST00000568249 801 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 MTATP6P3-201ENST00000581686 676 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 MIR3136-201ENST00000583498 78 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AC073648.5-201ENST00000603502 305 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AL356157.2-201ENST00000605122 111 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 AC013412.1-201ENST00000610687 192 ntBASIC1.9□□□□□ -2.11
GABPB1Q06547 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
GABPB1Q06547 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
GABPB1Q06547 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
GABPB1Q06547 AP000560.1-201ENST00000624150 1937 ntBASIC1.89□□□□□ -2.11
GABPB1Q06547 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
GABPB1Q06547 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms