Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC004865.1-201ENST00000442276 1003 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AL049830.1-201ENST00000468034 425 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AC018868.1-201ENST00000491307 315 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AC108740.1-201ENST00000498629 225 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 RNU6-667P-201ENST00000517186 102 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AC022432.1-201ENST00000595739 310 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 RPS26P42-201ENST00000413485 326 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 RPL37P6-201ENST00000460682 294 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.03□□□□□ -2.41
PRKDCP78527 MTCYBP43-201ENST00000513621 740 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 RNA5SP290-201ENST00000517133 127 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.03□□□□□ -2.41
PRKDCP78527 AP003066.2-201ENST00000529375 555 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 AL355598.1-201ENST00000604169 202 ntBASIC-0.03□□□□□ -2.41
PRKDCP78527 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.03□□□□□ -2.41
PRKDCP78527 RNU6-138P-201ENST00000515952 107 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 IGJP1-201ENST00000522682 475 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.04□□□□□ -2.42
PRKDCP78527 MIR3678-201ENST00000578455 94 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AP000860.1-201ENST00000605250 559 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AC090517.2-201ENST00000614966 680 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AC119751.3-201ENST00000399720 670 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.04□□□□□ -2.42
PRKDCP78527 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AL512637.2-201ENST00000431287 1256 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 MTCO3P45-201ENST00000443036 613 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 RPL7P55-201ENST00000450522 746 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AL121579.1-201ENST00000555129 305 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.04□□□□□ -2.42
PRKDCP78527 AC093249.1-201ENST00000567049 203 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 BNIP3P31-201ENST00000604515 566 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AC105148.1-201ENST00000604961 409 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AC112220.2-201ENST00000605513 533 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AC040896.1-201ENST00000613819 479 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
PRKDCP78527 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.04□□□□□ -2.42
PRKDCP78527 AC068647.2-201ENST00000637380 353 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.04□□□□□ -2.42
PRKDCP78527 AL353621.1-201ENST00000418219 243 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.04□□□□□ -2.42
PRKDCP78527 AL590556.1-201ENST00000423231 483 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 SPINT5P-201ENST00000448174 155 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 AC048334.1-201ENST00000477975 159 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 MIR3681-201ENST00000580089 72 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 RNU6-87P-201ENST00000607561 108 ntBASIC-0.04□□□□□ -2.42
PRKDCP78527 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
PRKDCP78527 SNORA25.3-201ENST00000363205 127 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
PRKDCP78527 SNORD99-201ENST00000408612 74 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 RNU6-575P-201ENST00000411326 105 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.05□□□□□ -2.42
PRKDCP78527 AL049874.1-201ENST00000489560 388 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 MTND2P33-201ENST00000506452 1031 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
PRKDCP78527 RAC1P9-201ENST00000604990 392 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AC093913.1-201ENST00000614178 329 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 RNA5SP259-201ENST00000365541 109 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 MIR605-201ENST00000385078 83 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 MTCO2P8-201ENST00000412213 658 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AC092634.6-201ENST00000418558 192 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.05□□□□□ -2.42
PRKDCP78527 DAP3P1-201ENST00000441522 278 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 MEMO1P3-201ENST00000459811 302 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.05□□□□□ -2.42
PRKDCP78527 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
PRKDCP78527 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AC016542.1-201ENST00000608259 493 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 RNU6-439P-201ENST00000384188 106 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 RNU6-163P-201ENST00000384396 106 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 MIR194-1-201ENST00000384892 85 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 COX6CP10-201ENST00000416832 224 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AP001324.2-201ENST00000461163 319 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 RNU4-54P-201ENST00000516428 129 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AC087897.1-201ENST00000550134 156 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.05□□□□□ -2.42
PRKDCP78527 AC013476.2-201ENST00000614456 459 ntBASIC-0.05□□□□□ -2.42
PRKDCP78527 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 SNORA72.2-201ENST00000365028 127 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 RNU6-438P-201ENST00000365561 103 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 RNU2-33P-201ENST00000410344 192 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 MTCO2P25-201ENST00000447065 681 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC-0.06□□□□□ -2.42
PRKDCP78527 AC114982.2-201ENST00000461396 358 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC011406.1-201ENST00000512440 370 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 SNORA31.17-201ENST00000516953 127 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC105185.1-201ENST00000518705 535 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 MIR5094-201ENST00000578766 85 ntBASIC-0.06□□□□□ -2.42
PRKDCP78527 AC126365.2-201ENST00000580630 379 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms