Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
IRX3P78415 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.75□□□□□ -2.13
IRX3P78415 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.75□□□□□ -2.13
IRX3P78415 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.75□□□□□ -2.13
IRX3P78415 AC109446.2-201ENST00000567872 497 ntBASIC1.75□□□□□ -2.13
IRX3P78415 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.75□□□□□ -2.13
IRX3P78415 SNRPGP17-201ENST00000603780 214 ntBASIC1.75□□□□□ -2.13
IRX3P78415 AC090578.1-201ENST00000604955 591 ntBASIC1.75□□□□□ -2.13
IRX3P78415 AC093788.1-201ENST00000609356 927 ntBASIC1.75□□□□□ -2.13
IRX3P78415 AC008993.2-201ENST00000631744 806 ntBASIC1.75□□□□□ -2.13
IRX3P78415 FGF7P2-201ENST00000332473 296 ntBASIC1.74□□□□□ -2.13
IRX3P78415 RNU6-655P-201ENST00000362858 107 ntBASIC1.74□□□□□ -2.13
IRX3P78415 RNU6-1210P-201ENST00000363775 107 ntBASIC1.74□□□□□ -2.13
IRX3P78415 RNU4-13P-201ENST00000364019 141 ntBASIC1.74□□□□□ -2.13
IRX3P78415 Y_RNA.355-201ENST00000365462 98 ntBASIC1.74□□□□□ -2.13
IRX3P78415 SNORA25B-201ENST00000365507 128 ntBASIC1.74□□□□□ -2.13
IRX3P78415 MIR29B2-201ENST00000385055 81 ntBASIC1.74□□□□□ -2.13
IRX3P78415 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
IRX3P78415 AL031779.1-201ENST00000415663 330 ntBASIC1.74□□□□□ -2.13
IRX3P78415 MTND3P17-201ENST00000416968 344 ntBASIC1.74□□□□□ -2.13
IRX3P78415 CYCSP46-201ENST00000423569 204 ntBASIC1.74□□□□□ -2.13
IRX3P78415 USP9YP18-201ENST00000425912 695 ntBASIC1.74□□□□□ -2.13
IRX3P78415 SDAD1P3-201ENST00000427380 333 ntBASIC1.74□□□□□ -2.13
IRX3P78415 AC245102.2-201ENST00000448956 180 ntBASIC1.74□□□□□ -2.13
IRX3P78415 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.74□□□□□ -2.13
IRX3P78415 SNORA43.2-201ENST00000516652 128 ntBASIC1.74□□□□□ -2.13
IRX3P78415 AC034114.1-201ENST00000520293 285 ntBASIC1.74□□□□□ -2.13
IRX3P78415 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.74□□□□□ -2.13
IRX3P78415 MTATP6P24-201ENST00000576835 677 ntBASIC1.74□□□□□ -2.13
IRX3P78415 AC098848.2-201ENST00000588023 330 ntBASIC1.74□□□□□ -2.13
IRX3P78415 NIFKP6-201ENST00000598115 845 ntBASIC1.74□□□□□ -2.13
IRX3P78415 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.74□□□□□ -2.13
IRX3P78415 AC008250.2-201ENST00000615261 205 ntBASIC1.74□□□□□ -2.13
IRX3P78415 AC026585.1-201ENST00000619582 524 ntBASIC1.74□□□□□ -2.13
IRX3P78415 RMST_7.1-201ENST00000621935 268 ntBASIC1.74□□□□□ -2.13
IRX3P78415 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
IRX3P78415 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
IRX3P78415 AC233981.2-201ENST00000611524 1614 ntBASIC1.73□□□□□ -2.13
IRX3P78415 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.73□□□□□ -2.13
IRX3P78415 MIR578-201ENST00000384828 96 ntBASIC1.73□□□□□ -2.13
IRX3P78415 MIR454-201ENST00000390180 115 ntBASIC1.73□□□□□ -2.13
IRX3P78415 SNORA40.3-201ENST00000390964 122 ntBASIC1.73□□□□□ -2.13
IRX3P78415 BTF3L4P1-201ENST00000413813 468 ntBASIC1.73□□□□□ -2.13
IRX3P78415 OR6C66P-201ENST00000414917 930 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AL354695.1-201ENST00000427935 228 ntBASIC1.73□□□□□ -2.13
IRX3P78415 MTATP6P16-201ENST00000434543 526 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AC104850.1-201ENST00000435940 476 ntBASIC1.73□□□□□ -2.13
IRX3P78415 CALM1P1-201ENST00000442082 433 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AL360271.2-201ENST00000447710 161 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.73□□□□□ -2.13
IRX3P78415 RNU7-182P-201ENST00000459009 62 ntBASIC1.73□□□□□ -2.13
IRX3P78415 RAP1BP2-201ENST00000478270 544 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AC114801.2-201ENST00000503825 781 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.73□□□□□ -2.13
IRX3P78415 LRRC34P2-201ENST00000514850 553 ntBASIC1.73□□□□□ -2.13
IRX3P78415 SCARNA24.1-201ENST00000516465 137 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.73□□□□□ -2.13
IRX3P78415 MIR3915-201ENST00000578518 97 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.73□□□□□ -2.13
IRX3P78415 AC016925.2-201ENST00000605108 242 ntBASIC1.73□□□□□ -2.13
IRX3P78415 AC109347.2-201ENST00000610220 349 ntBASIC1.73□□□□□ -2.13
IRX3P78415 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
IRX3P78415 AC093648.1-201ENST00000623546 606 ntBASIC1.73□□□□□ -2.13
IRX3P78415 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
IRX3P78415 Y_RNA.224-201ENST00000364308 111 ntBASIC1.72□□□□□ -2.13
IRX3P78415 RNY4P34-201ENST00000364779 95 ntBASIC1.72□□□□□ -2.13
IRX3P78415 SNORD115-7-201ENST00000365306 82 ntBASIC1.72□□□□□ -2.13
IRX3P78415 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
IRX3P78415 SNORD116-20-201ENST00000384529 92 ntBASIC1.72□□□□□ -2.13
IRX3P78415 MIR518A2-201ENST00000384966 87 ntBASIC1.72□□□□□ -2.13
IRX3P78415 MIR29C-201ENST00000385231 88 ntBASIC1.72□□□□□ -2.13
IRX3P78415 RNU6-607P-201ENST00000411283 108 ntBASIC1.72□□□□□ -2.13
IRX3P78415 EEF1A1P40-201ENST00000412883 573 ntBASIC1.72□□□□□ -2.13
IRX3P78415 RPL21P90-201ENST00000415692 466 ntBASIC1.72□□□□□ -2.13
IRX3P78415 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.72□□□□□ -2.13
IRX3P78415 ART2BP-201ENST00000453501 499 ntBASIC1.72□□□□□ -2.13
IRX3P78415 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.72□□□□□ -2.13
IRX3P78415 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.72□□□□□ -2.13
IRX3P78415 AC104806.1-201ENST00000508720 308 ntBASIC1.72□□□□□ -2.13
IRX3P78415 AC074344.1-201ENST00000512823 224 ntBASIC1.72□□□□□ -2.13
IRX3P78415 SNORD27.1-201ENST00000516319 72 ntBASIC1.72□□□□□ -2.13
IRX3P78415 Y_RNA.687-201ENST00000516558 91 ntBASIC1.72□□□□□ -2.13
IRX3P78415 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.72□□□□□ -2.13
IRX3P78415 AC018630.3-201ENST00000542637 96 ntBASIC1.72□□□□□ -2.13
IRX3P78415 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.72□□□□□ -2.13
IRX3P78415 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.72□□□□□ -2.13
IRX3P78415 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.72□□□□□ -2.13
IRX3P78415 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.72□□□□□ -2.13
IRX3P78415 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.72□□□□□ -2.13
IRX3P78415 DEFB131E-202ENST00000602581 683 ntBASIC1.72□□□□□ -2.13
IRX3P78415 AC006566.1-201ENST00000608943 513 ntBASIC1.72□□□□□ -2.13
IRX3P78415 MIR7974-201ENST00000615835 79 ntBASIC1.72□□□□□ -2.13
IRX3P78415 AC009159.2-201ENST00000617603 606 ntBASIC1.72□□□□□ -2.13
IRX3P78415 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
IRX3P78415 SEPT14P19-203ENST00000633205 211 ntBASIC1.72□□□□□ -2.13
IRX3P78415 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
IRX3P78415 RNU4-21P-201ENST00000362802 126 ntBASIC1.71□□□□□ -2.14
IRX3P78415 SNORD3E-201ENST00000362899 217 ntBASIC1.71□□□□□ -2.14
IRX3P78415 Y_RNA.116-201ENST00000363292 103 ntBASIC1.71□□□□□ -2.14
IRX3P78415 RNU6-384P-201ENST00000364900 104 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms