Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NKX3-2P78367 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NKX3-2P78367 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
NKX3-2P78367 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NKX3-2P78367 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.72□□□□□ -1.81
NKX3-2P78367 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.81
NKX3-2P78367 AC091152.2-201ENST00000591628 2569 ntBASIC3.71□□□□□ -1.81
NKX3-2P78367 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.71□□□□□ -1.82
NKX3-2P78367 RNA5SP197-201ENST00000363357 119 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 Y_RNA.143-201ENST00000363520 106 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 RNU6-105P-201ENST00000363909 104 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
NKX3-2P78367 MIR493-201ENST00000385254 89 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 RNU2-20P-201ENST00000410425 191 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 AC092047.1-201ENST00000424997 240 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.71□□□□□ -1.82
NKX3-2P78367 AC004383.1-201ENST00000438135 289 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.71□□□□□ -1.82
NKX3-2P78367 AL513124.1-201ENST00000450410 614 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 AL139109.1-201ENST00000455491 297 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.71□□□□□ -1.82
NKX3-2P78367 Y_RNA.713-201ENST00000517013 96 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 DEFB108E-201ENST00000524692 240 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 AC022080.3-201ENST00000544433 482 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 AC093023.1-201ENST00000547375 507 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 MIR4300-201ENST00000581016 96 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 AC010928.2-201ENST00000588017 287 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 AL512605.2-201ENST00000592972 256 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 MIR376A1-201ENST00000616574 68 ntBASIC3.71□□□□□ -1.82
NKX3-2P78367 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.71□□□□□ -1.82
NKX3-2P78367 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NKX3-2P78367 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX3-2P78367 AL391987.6-201ENST00000305671 199 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 FTLP6-201ENST00000355274 422 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 MIR422A-201ENST00000362286 90 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 Y_RNA.16-201ENST00000362421 102 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 SNORA7.2-201ENST00000364446 145 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 Y_RNA.439-201ENST00000384119 94 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 RNY3P4-201ENST00000384428 101 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 BTF3L4P2-201ENST00000392798 346 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX3-2P78367 MIR548H3-201ENST00000408771 118 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AP000275.1-201ENST00000411943 390 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AL358453.1-201ENST00000422522 250 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 TMEM167AP1-201ENST00000423409 219 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AC096920.1-201ENST00000423991 241 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 RPL21P66-201ENST00000426566 466 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX3-2P78367 RPL21P40-201ENST00000428586 483 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX3-2P78367 AL357552.1-201ENST00000445254 415 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 RN7SL93P-201ENST00000463035 293 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX3-2P78367 ANXA2P1-201ENST00000505539 926 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX3-2P78367 SNORA43.2-201ENST00000516652 128 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 RNU6-703P-201ENST00000516946 107 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 RNU6-1183P-201ENST00000517054 60 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AC091144.1-201ENST00000519573 138 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX3-2P78367 HIGD1AP1-201ENST00000550979 275 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 H3F3AP1-201ENST00000559984 334 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 MIR4782-201ENST00000577987 79 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AL451007.1-201ENST00000595491 289 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AL162274.2-201ENST00000614406 332 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AC022149.2-201ENST00000621061 203 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AC092628.2-201ENST00000622492 339 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 AC027309.3-201ENST00000623419 351 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 SCARNA4-202ENST00000625402 129 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX3-2P78367 AC244205.2-202ENST00000635781 342 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX3-2P78367 AC241585.2-209ENST00000638217 143 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NKX3-2P78367 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NKX3-2P78367 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX3-2P78367 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
NKX3-2P78367 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX3-2P78367 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX3-2P78367 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
NKX3-2P78367 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX3-2P78367 RNU6-222P-201ENST00000362438 107 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 RNU1-18P-201ENST00000363062 164 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 Y_RNA.117-201ENST00000363294 101 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 RNU1-140P-201ENST00000365040 165 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX3-2P78367 RNU6-1062P-201ENST00000383908 107 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 Y_RNA.462-201ENST00000384268 102 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 SNORA44-201ENST00000384584 132 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 MIR591-201ENST00000385290 95 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 AL603910.2-201ENST00000407268 136 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 U3.37-201ENST00000408528 213 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 RNU4-61P-201ENST00000411243 107 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX3-2P78367 SETP5-201ENST00000437270 562 ntBASIC3.69□□□□□ -1.82
NKX3-2P78367 AC107083.1-201ENST00000439643 279 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms