Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.05□□□□□ -2.4
UBA52P62987 AC092354.1-201ENST00000606057 376 ntBASIC0.05□□□□□ -2.4
UBA52P62987 TUG1_2.1-201ENST00000614234 87 ntBASIC0.05□□□□□ -2.4
UBA52P62987 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.05□□□□□ -2.4
UBA52P62987 DBF4P1-201ENST00000412976 1892 ntBASIC0.05□□□□□ -2.4
UBA52P62987 Y_RNA.332-201ENST00000365271 113 ntBASIC0.04□□□□□ -2.4
UBA52P62987 CBX3P9-201ENST00000402326 552 ntBASIC0.04□□□□□ -2.4
UBA52P62987 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.04□□□□□ -2.4
UBA52P62987 BRK1P2-201ENST00000442875 223 ntBASIC0.04□□□□□ -2.4
UBA52P62987 AL353752.1-201ENST00000454946 260 ntBASIC0.04□□□□□ -2.4
UBA52P62987 AC026410.2-201ENST00000460281 156 ntBASIC0.04□□□□□ -2.4
UBA52P62987 AC113410.1-201ENST00000505029 247 ntBASIC0.04□□□□□ -2.4
UBA52P62987 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.04□□□□□ -2.4
UBA52P62987 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.04□□□□□ -2.4
UBA52P62987 AC023050.2-201ENST00000544968 387 ntBASIC0.04□□□□□ -2.4
UBA52P62987 AC126177.8-201ENST00000618339 1015 ntBASIC0.04□□□□□ -2.4
UBA52P62987 AC123767.1-202ENST00000620407 817 ntBASIC0.04□□□□□ -2.4
UBA52P62987 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
UBA52P62987 RNU6-655P-201ENST00000362858 107 ntBASIC0.03□□□□□ -2.4
UBA52P62987 Y_RNA.294-201ENST00000364916 102 ntBASIC0.03□□□□□ -2.4
UBA52P62987 RNU6-1327P-201ENST00000365302 105 ntBASIC0.03□□□□□ -2.4
UBA52P62987 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.03□□□□□ -2.4
UBA52P62987 RNU6-1176P-201ENST00000390955 107 ntBASIC0.03□□□□□ -2.4
UBA52P62987 RNU6-754P-201ENST00000391166 107 ntBASIC0.03□□□□□ -2.4
UBA52P62987 RPL22P18-201ENST00000417197 377 ntBASIC0.03□□□□□ -2.4
UBA52P62987 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.03□□□□□ -2.4
UBA52P62987 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.03□□□□□ -2.4
UBA52P62987 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.03□□□□□ -2.4
UBA52P62987 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.03□□□□□ -2.4
UBA52P62987 MTCYBP11-201ENST00000447254 1109 ntBASIC0.03□□□□□ -2.4
UBA52P62987 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.03□□□□□ -2.4
UBA52P62987 AC067940.1-201ENST00000458411 300 ntBASIC0.03□□□□□ -2.4
UBA52P62987 snoU13.30-201ENST00000458951 104 ntBASIC0.03□□□□□ -2.4
UBA52P62987 RNU6-333P-201ENST00000459117 107 ntBASIC0.03□□□□□ -2.4
UBA52P62987 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.03□□□□□ -2.4
UBA52P62987 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.03□□□□□ -2.4
UBA52P62987 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.03□□□□□ -2.4
UBA52P62987 AC022493.2-201ENST00000506122 481 ntBASIC0.03□□□□□ -2.4
UBA52P62987 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.03□□□□□ -2.4
UBA52P62987 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
UBA52P62987 MIR4431-201ENST00000579990 94 ntBASIC0.03□□□□□ -2.4
UBA52P62987 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.03□□□□□ -2.4
UBA52P62987 AC133794.1-201ENST00000602731 914 ntBASIC0.03□□□□□ -2.4
UBA52P62987 AC078795.2-201ENST00000602835 1252 ntBASIC0.03□□□□□ -2.4
UBA52P62987 7SK.7-201ENST00000603504 247 ntBASIC0.03□□□□□ -2.4
UBA52P62987 U6.99-201ENST00000637524 83 ntBASIC0.03□□□□□ -2.4
UBA52P62987 RNU6-839P-201ENST00000363347 108 ntBASIC0.02□□□□□ -2.41
UBA52P62987 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
UBA52P62987 Y_RNA.234-201ENST00000364409 97 ntBASIC0.02□□□□□ -2.41
UBA52P62987 RNU6-1078P-201ENST00000364522 103 ntBASIC0.02□□□□□ -2.41
UBA52P62987 MIR29B2-201ENST00000385055 81 ntBASIC0.02□□□□□ -2.41
UBA52P62987 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.02□□□□□ -2.41
UBA52P62987 AC138623.1-201ENST00000418060 216 ntBASIC0.02□□□□□ -2.41
UBA52P62987 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.02□□□□□ -2.41
UBA52P62987 MTCO3P1-205ENST00000422088 832 ntBASIC0.02□□□□□ -2.41
UBA52P62987 AL139421.1-201ENST00000423010 169 ntBASIC0.02□□□□□ -2.41
UBA52P62987 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.02□□□□□ -2.41
UBA52P62987 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.02□□□□□ -2.41
UBA52P62987 AC245047.7-201ENST00000440265 293 ntBASIC0.02□□□□□ -2.41
UBA52P62987 RPEP5-201ENST00000441137 268 ntBASIC0.02□□□□□ -2.41
UBA52P62987 snoU13.27-201ENST00000459278 104 ntBASIC0.02□□□□□ -2.41
UBA52P62987 RPL39P38-201ENST00000467018 153 ntBASIC0.02□□□□□ -2.41
UBA52P62987 AC105758.1-201ENST00000506038 399 ntBASIC0.02□□□□□ -2.41
UBA52P62987 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.02□□□□□ -2.41
UBA52P62987 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.02□□□□□ -2.41
UBA52P62987 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.02□□□□□ -2.41
UBA52P62987 AC137800.2-201ENST00000574375 120 ntBASIC0.02□□□□□ -2.41
UBA52P62987 AL390208.1-201ENST00000605885 644 ntBASIC0.02□□□□□ -2.41
UBA52P62987 AC021506.2-201ENST00000612354 169 ntBASIC0.02□□□□□ -2.41
UBA52P62987 AL163051.2-201ENST00000618976 735 ntBASIC0.02□□□□□ -2.41
UBA52P62987 AC019226.1-201ENST00000625666 515 ntBASIC0.02□□□□□ -2.41
UBA52P62987 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
UBA52P62987 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.02□□□□□ -2.41
UBA52P62987 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.01□□□□□ -2.41
UBA52P62987 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.01□□□□□ -2.41
UBA52P62987 RNU6-1210P-201ENST00000363775 107 ntBASIC0.01□□□□□ -2.41
UBA52P62987 RNU6-512P-201ENST00000364438 103 ntBASIC0.01□□□□□ -2.41
UBA52P62987 UBE2V1P11-201ENST00000411559 285 ntBASIC0.01□□□□□ -2.41
UBA52P62987 AC011233.1-201ENST00000422812 283 ntBASIC0.01□□□□□ -2.41
UBA52P62987 DAP3P1-201ENST00000441522 278 ntBASIC0.01□□□□□ -2.41
UBA52P62987 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.01□□□□□ -2.41
UBA52P62987 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.01□□□□□ -2.41
UBA52P62987 AC233266.1-201ENST00000454518 96 ntBASIC0.01□□□□□ -2.41
UBA52P62987 snoU13.14-201ENST00000459372 104 ntBASIC0.01□□□□□ -2.41
UBA52P62987 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.01□□□□□ -2.41
UBA52P62987 RNA5SP337-201ENST00000517007 109 ntBASIC0.01□□□□□ -2.41
UBA52P62987 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.01□□□□□ -2.41
UBA52P62987 AC090615.1-201ENST00000577519 154 ntBASIC0.01□□□□□ -2.41
UBA52P62987 AC060771.1-201ENST00000582031 164 ntBASIC0.01□□□□□ -2.41
UBA52P62987 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.01□□□□□ -2.41
UBA52P62987 AC022022.2-201ENST00000602989 360 ntBASIC0.01□□□□□ -2.41
UBA52P62987 AC242852.1-201ENST00000612151 96 ntBASIC0.01□□□□□ -2.41
UBA52P62987 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.01□□□□□ -2.41
UBA52P62987 AC084824.4-201ENST00000620106 731 ntBASIC0.01□□□□□ -2.41
UBA52P62987 AC244015.1-201ENST00000622301 99 ntBASIC0.01□□□□□ -2.41
UBA52P62987 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
UBA52P62987 AC107982.1-201ENST00000507171 1300 ntBASIC0.01□□□□□ -2.41
UBA52P62987 RNU6-105P-201ENST00000363909 104 ntBASIC0□□□□□ -2.41
UBA52P62987 RNA5SP259-201ENST00000365541 109 ntBASIC0□□□□□ -2.41
UBA52P62987 SNORD89-201ENST00000390981 114 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms