Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 Y_RNA.687-201ENST00000516558 91 ntBASIC0.73□□□□□ -2.29
LSM6P62312 RNU6-113P-201ENST00000516653 101 ntBASIC0.73□□□□□ -2.29
LSM6P62312 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.73□□□□□ -2.29
LSM6P62312 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM6P62312 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM6P62312 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM6P62312 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.73□□□□□ -2.29
LSM6P62312 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.73□□□□□ -2.29
LSM6P62312 MIR3664-201ENST00000579074 99 ntBASIC0.73□□□□□ -2.29
LSM6P62312 AC107304.1-201ENST00000604229 296 ntBASIC0.73□□□□□ -2.29
LSM6P62312 AL133216.2-202ENST00000634512 349 ntBASIC0.73□□□□□ -2.29
LSM6P62312 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.72□□□□□ -2.29
LSM6P62312 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.72□□□□□ -2.29
LSM6P62312 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
LSM6P62312 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.72□□□□□ -2.29
LSM6P62312 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
LSM6P62312 RNU6-438P-201ENST00000365561 103 ntBASIC0.72□□□□□ -2.29
LSM6P62312 MIR194-1-201ENST00000384892 85 ntBASIC0.72□□□□□ -2.29
LSM6P62312 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.72□□□□□ -2.29
LSM6P62312 MTCO1P21-201ENST00000416634 589 ntBASIC0.72□□□□□ -2.29
LSM6P62312 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.72□□□□□ -2.29
LSM6P62312 AC245047.4-201ENST00000433189 144 ntBASIC0.72□□□□□ -2.29
LSM6P62312 MTND1P30-201ENST00000441241 901 ntBASIC0.72□□□□□ -2.29
LSM6P62312 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.72□□□□□ -2.29
LSM6P62312 snoU13.27-201ENST00000459278 104 ntBASIC0.72□□□□□ -2.29
LSM6P62312 AC079395.1-201ENST00000510981 262 ntBASIC0.72□□□□□ -2.29
LSM6P62312 RNU6-1053P-201ENST00000515930 101 ntBASIC0.72□□□□□ -2.29
LSM6P62312 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.72□□□□□ -2.29
LSM6P62312 BNIP3P6-201ENST00000549284 499 ntBASIC0.72□□□□□ -2.29
LSM6P62312 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.72□□□□□ -2.29
LSM6P62312 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.72□□□□□ -2.29
LSM6P62312 VN1R107P-201ENST00000601784 209 ntBASIC0.72□□□□□ -2.29
LSM6P62312 AL365434.2-201ENST00000607979 234 ntBASIC0.72□□□□□ -2.29
LSM6P62312 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
LSM6P62312 RNU6-960P-201ENST00000364056 120 ntBASIC0.71□□□□□ -2.3
LSM6P62312 Y_RNA.338-201ENST00000365320 114 ntBASIC0.71□□□□□ -2.3
LSM6P62312 RNU6-946P-201ENST00000383878 107 ntBASIC0.71□□□□□ -2.3
LSM6P62312 RAP1BP3-201ENST00000407180 549 ntBASIC0.71□□□□□ -2.3
LSM6P62312 CYCSP33-201ENST00000414485 327 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.71□□□□□ -2.3
LSM6P62312 ATP5J2P3-201ENST00000451550 258 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AL122001.1-201ENST00000457027 370 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.71□□□□□ -2.3
LSM6P62312 RPS26P45-201ENST00000471748 340 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AC022447.4-201ENST00000504053 364 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AC103851.1-201ENST00000506833 274 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AC112206.3-201ENST00000514578 389 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AP003049.1-201ENST00000529418 457 ntBASIC0.71□□□□□ -2.3
LSM6P62312 CBX3P8-201ENST00000532412 525 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.71□□□□□ -2.3
LSM6P62312 AC008507.2-201ENST00000588402 1176 ntBASIC0.71□□□□□ -2.3
LSM6P62312 BNIP3P8-201ENST00000597863 560 ntBASIC0.71□□□□□ -2.3
LSM6P62312 AC040896.1-201ENST00000613819 479 ntBASIC0.71□□□□□ -2.3
LSM6P62312 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
LSM6P62312 RNU5E-6P-201ENST00000365574 115 ntBASIC0.7□□□□□ -2.3
LSM6P62312 MIR19B1-201ENST00000384829 87 ntBASIC0.7□□□□□ -2.3
LSM6P62312 AC092809.3-201ENST00000415453 231 ntBASIC0.7□□□□□ -2.3
LSM6P62312 ARL5AP1-201ENST00000418991 388 ntBASIC0.7□□□□□ -2.3
LSM6P62312 AC006366.1-201ENST00000422002 759 ntBASIC0.7□□□□□ -2.3
LSM6P62312 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.7□□□□□ -2.3
LSM6P62312 RPS4XP11-201ENST00000446897 772 ntBASIC0.7□□□□□ -2.3
LSM6P62312 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.7□□□□□ -2.3
LSM6P62312 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.7□□□□□ -2.3
LSM6P62312 ACA64.5-201ENST00000516207 127 ntBASIC0.7□□□□□ -2.3
LSM6P62312 Y_RNA.689-201ENST00000516589 107 ntBASIC0.7□□□□□ -2.3
LSM6P62312 SNORA70.22-201ENST00000517160 124 ntBASIC0.7□□□□□ -2.3
LSM6P62312 MTND3P13-201ENST00000574391 343 ntBASIC0.7□□□□□ -2.3
LSM6P62312 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
LSM6P62312 AL359547.2-201ENST00000615810 418 ntBASIC0.7□□□□□ -2.3
LSM6P62312 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.7□□□□□ -2.3
LSM6P62312 AL158163.2-201ENST00000619110 700 ntBASIC0.7□□□□□ -2.3
LSM6P62312 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.7□□□□□ -2.3
LSM6P62312 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.7□□□□□ -2.3
LSM6P62312 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.69□□□□□ -2.3
LSM6P62312 SNORA18.2-201ENST00000383865 132 ntBASIC0.69□□□□□ -2.3
LSM6P62312 COX6CP10-201ENST00000416832 224 ntBASIC0.69□□□□□ -2.3
LSM6P62312 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.69□□□□□ -2.3
LSM6P62312 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.69□□□□□ -2.3
LSM6P62312 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.69□□□□□ -2.3
LSM6P62312 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.69□□□□□ -2.3
LSM6P62312 snoU13.30-201ENST00000458951 104 ntBASIC0.69□□□□□ -2.3
LSM6P62312 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.69□□□□□ -2.3
LSM6P62312 MIR449C-201ENST00000516047 92 ntBASIC0.69□□□□□ -2.3
LSM6P62312 RNU2-10P-201ENST00000516375 211 ntBASIC0.69□□□□□ -2.3
LSM6P62312 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.69□□□□□ -2.3
LSM6P62312 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.69□□□□□ -2.3
LSM6P62312 AC068587.4-201ENST00000533893 186 ntBASIC0.69□□□□□ -2.3
LSM6P62312 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.69□□□□□ -2.3
LSM6P62312 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
LSM6P62312 AP005136.1-201ENST00000579765 429 ntBASIC0.69□□□□□ -2.3
LSM6P62312 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
LSM6P62312 BNIP3P10-201ENST00000605360 577 ntBASIC0.69□□□□□ -2.3
LSM6P62312 AC024060.1-201ENST00000607052 494 ntBASIC0.69□□□□□ -2.3
LSM6P62312 AC083806.3-201ENST00000614016 455 ntBASIC0.69□□□□□ -2.3
LSM6P62312 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
LSM6P62312 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LSM6P62312 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
LSM6P62312 SNORD114-27-201ENST00000363766 70 ntBASIC0.68□□□□□ -2.3
LSM6P62312 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
LSM6P62312 RNY3P13-201ENST00000365542 102 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms