Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR4714-201ENST00000580728 77 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.24□□□□□ -2.37
CKS1BP61024 Z83818.1-201ENST00000603584 150 ntBASIC0.24□□□□□ -2.37
CKS1BP61024 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
CKS1BP61024 RNU6-707P-201ENST00000364647 95 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 RNU6-744P-201ENST00000365557 107 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 RNU6-1316P-201ENST00000384242 108 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 RNU6-1235P-201ENST00000384559 107 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.23□□□□□ -2.37
CKS1BP61024 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.23□□□□□ -2.37
CKS1BP61024 AC092628.1-201ENST00000436250 252 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.23□□□□□ -2.37
CKS1BP61024 RNU6-953P-201ENST00000459154 107 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 RNU6-498P-201ENST00000459468 107 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AC026414.1-201ENST00000504046 698 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 FABP5P5-201ENST00000515537 406 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
CKS1BP61024 APOOP3-201ENST00000536787 586 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 BNIP3P6-201ENST00000549284 499 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AL157871.3-201ENST00000557231 293 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.23□□□□□ -2.37
CKS1BP61024 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.23□□□□□ -2.37
CKS1BP61024 AC136443.5-201ENST00000603741 370 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AC126177.8-201ENST00000618339 1015 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.23□□□□□ -2.37
CKS1BP61024 AL138955.1-201ENST00000622881 1040 ntBASIC0.23□□□□□ -2.37
CKS1BP61024 AC134026.1-201ENST00000623249 2239 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 MTND4P14-201ENST00000435799 1354 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 RNU6-969P-201ENST00000383900 105 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 SNORD116-20-201ENST00000384529 92 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 Y_RNA.534-201ENST00000384599 112 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 RNA5SP111-201ENST00000411386 101 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.22□□□□□ -2.37
CKS1BP61024 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.22□□□□□ -2.37
CKS1BP61024 MTCYBP5-201ENST00000423752 1135 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 AC092423.1-201ENST00000430165 186 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 AC245047.7-201ENST00000440265 293 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.22□□□□□ -2.37
CKS1BP61024 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.22□□□□□ -2.37
CKS1BP61024 AC122134.1-202ENST00000569111 1201 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 MIR4293-201ENST00000584305 78 ntBASIC0.22□□□□□ -2.37
CKS1BP61024 Y_RNA.33-201ENST00000362591 102 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 U3.8-201ENST00000363675 217 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 RNU1-96P-201ENST00000364163 162 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 RNU6-72P-201ENST00000384285 79 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 SNORA80D-201ENST00000384488 135 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 RNU6-883P-201ENST00000384597 107 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 RNU2-42P-201ENST00000410697 113 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 MTCO3P41-201ENST00000414801 328 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 AL365338.1-201ENST00000422282 858 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 RPL18AP17-201ENST00000455326 198 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.21□□□□□ -2.38
CKS1BP61024 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.21□□□□□ -2.38
CKS1BP61024 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.21□□□□□ -2.38
CKS1BP61024 AC024589.1-201ENST00000512207 263 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 RNU4-57P-201ENST00000515980 135 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 MIR449C-201ENST00000516047 92 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 MTND1P36-201ENST00000522384 936 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.21□□□□□ -2.38
CKS1BP61024 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.21□□□□□ -2.38
CKS1BP61024 AC091135.1-201ENST00000585943 307 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 AC098483.2-201ENST00000603158 454 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 AL359757.2-201ENST00000624309 274 ntBASIC0.21□□□□□ -2.38
CKS1BP61024 RNA5SP499-201ENST00000363982 119 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 AF228730.1-201ENST00000397972 663 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 MTCO1P3-201ENST00000429327 192 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 AC098934.3-201ENST00000430450 190 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 USP9YP14-201ENST00000430663 563 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.2□□□□□ -2.38
CKS1BP61024 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.2□□□□□ -2.38
CKS1BP61024 RPS29P1-201ENST00000465274 159 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.2□□□□□ -2.38
CKS1BP61024 AC113410.1-201ENST00000505029 247 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 AC105758.1-201ENST00000506038 399 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.2□□□□□ -2.38
CKS1BP61024 RNU6-64P-201ENST00000517119 105 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.2□□□□□ -2.38
CKS1BP61024 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.2□□□□□ -2.38
CKS1BP61024 MIR1273C-201ENST00000578669 77 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 AL136363.2-201ENST00000604173 851 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 AC243829.6-201ENST00000612652 106 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 AL159152.1-201ENST00000635019 2587 ntBASIC0.2□□□□□ -2.38
CKS1BP61024 RNU6-395P-201ENST00000365662 106 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 RNU6-1237P-201ENST00000384777 107 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 MIR19A-201ENST00000384878 82 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.19□□□□□ -2.38
CKS1BP61024 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.19□□□□□ -2.38
CKS1BP61024 DEFB130D-201ENST00000426866 237 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 AL035398.1-201ENST00000430869 322 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 SNRPEP8-201ENST00000442866 260 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 AC073910.1-201ENST00000445047 438 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.19□□□□□ -2.38
CKS1BP61024 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.19□□□□□ -2.38
CKS1BP61024 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.19□□□□□ -2.38
CKS1BP61024 ATP5EP1-201ENST00000510257 156 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 RN7SKP12-201ENST00000516275 143 ntBASIC0.19□□□□□ -2.38
CKS1BP61024 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms