Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC084824.5-201ENST00000612009 413 ntBASIC0.74□□□□□ -2.29
SPCS3P61009 AC026585.1-201ENST00000619582 524 ntBASIC0.74□□□□□ -2.29
SPCS3P61009 AC131159.1-201ENST00000621854 213 ntBASIC0.74□□□□□ -2.29
SPCS3P61009 Y_RNA.46-201ENST00000362695 102 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 RNY4P24-201ENST00000362735 96 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 RNU6-862P-201ENST00000362804 105 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 RNU6-78P-201ENST00000362897 107 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 RNU6-1285P-201ENST00000363480 105 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 SNORD116-12-201ENST00000384468 92 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 RNU6-331P-201ENST00000384724 107 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 MIR578-201ENST00000384828 96 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 MIR544A-201ENST00000384855 91 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.73□□□□□ -2.29
SPCS3P61009 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.73□□□□□ -2.29
SPCS3P61009 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.73□□□□□ -2.29
SPCS3P61009 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 AC108667.1-201ENST00000428618 249 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.73□□□□□ -2.29
SPCS3P61009 RPS4XP11-201ENST00000446897 772 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 HSPE1P13-201ENST00000451143 297 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 ATP5J2P3-201ENST00000451550 258 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 AC022447.4-201ENST00000504053 364 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 MTND3P5-201ENST00000512798 333 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 RNA5SP503-201ENST00000517047 117 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.73□□□□□ -2.29
SPCS3P61009 AC013244.2-201ENST00000603396 103 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 AL451064.1-201ENST00000607718 471 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 AL138955.1-201ENST00000622881 1040 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 AC008163.1-202ENST00000636004 2889 ntBASIC0.73□□□□□ -2.29
SPCS3P61009 RNU6-433P-201ENST00000363216 104 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 MIR764-201ENST00000390811 85 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AL136310.1-201ENST00000404926 654 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.72□□□□□ -2.29
SPCS3P61009 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.72□□□□□ -2.29
SPCS3P61009 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.72□□□□□ -2.29
SPCS3P61009 snoU13.23-201ENST00000458863 104 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 snoU13.27-201ENST00000459278 104 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AC108210.2-201ENST00000503681 201 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 ATP5EP1-201ENST00000510257 156 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AC010587.2-201ENST00000511727 448 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.72□□□□□ -2.29
SPCS3P61009 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.72□□□□□ -2.29
SPCS3P61009 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.72□□□□□ -2.29
SPCS3P61009 BNIP3P8-201ENST00000597863 560 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AC092106.3-201ENST00000611308 722 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AC083806.3-201ENST00000614016 455 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AL353997.5-201ENST00000618886 171 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AL159152.1-201ENST00000635019 2587 ntBASIC0.72□□□□□ -2.29
SPCS3P61009 AL391987.6-201ENST00000305671 199 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 Y_RNA.110-201ENST00000363220 99 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 RNU6-438P-201ENST00000365561 103 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 SNORA32.2-201ENST00000384049 122 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 Y_RNA.465-201ENST00000384293 102 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.71□□□□□ -2.3
SPCS3P61009 AC019070.1-201ENST00000415008 1024 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 AL031779.1-201ENST00000415663 330 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 MTCO1P21-201ENST00000416634 589 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 ARL5AP1-201ENST00000418991 388 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 AC006366.1-201ENST00000422002 759 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 MTCO3P29-201ENST00000432119 779 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 AL591043.1-201ENST00000432461 424 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.71□□□□□ -2.3
SPCS3P61009 RPS27P1-201ENST00000450552 247 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.71□□□□□ -2.3
SPCS3P61009 MTCO3P28-201ENST00000513351 515 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.71□□□□□ -2.3
SPCS3P61009 AC123904.2-201ENST00000548059 300 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.71□□□□□ -2.3
SPCS3P61009 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.71□□□□□ -2.3
SPCS3P61009 AC104073.3-201ENST00000610942 955 ntBASIC0.71□□□□□ -2.3
SPCS3P61009 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SPCS3P61009 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SPCS3P61009 MIR378A-201ENST00000362177 66 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 SNORA12.2-201ENST00000391040 156 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.7□□□□□ -2.3
SPCS3P61009 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.7□□□□□ -2.3
SPCS3P61009 MTCYBP39-201ENST00000437562 491 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AC069257.2-201ENST00000441819 155 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.7□□□□□ -2.3
SPCS3P61009 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.7□□□□□ -2.3
SPCS3P61009 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.7□□□□□ -2.3
SPCS3P61009 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.7□□□□□ -2.3
SPCS3P61009 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AC104806.1-201ENST00000508720 308 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.7□□□□□ -2.3
SPCS3P61009 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.7□□□□□ -2.3
SPCS3P61009 AC011979.2-201ENST00000527568 352 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 AC015712.3-201ENST00000559380 164 ntBASIC0.7□□□□□ -2.3
SPCS3P61009 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.7□□□□□ -2.3
SPCS3P61009 AC008088.1-201ENST00000580993 280 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms