Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.56□□□□□ -2
ERVFC1-1P60608 RN7SKP18-201ENST00000516005 275 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 SCARNA20.6-201ENST00000517251 106 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC109329.1-201ENST00000518744 317 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC144568.1-201ENST00000520139 137 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.56□□□□□ -2
ERVFC1-1P60608 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.56□□□□□ -2
ERVFC1-1P60608 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC024220.1-201ENST00000603675 484 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC100812.1-201ENST00000607622 580 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC002076.2-201ENST00000617362 122 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC012314.7-201ENST00000619693 93 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AC006111.3-201ENST00000622137 383 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 SCARNA4-202ENST00000625402 129 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 AL034408.1-202ENST00000636088 415 ntBASIC2.56□□□□□ -2
ERVFC1-1P60608 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
ERVFC1-1P60608 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
ERVFC1-1P60608 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.56□□□□□ -2
ERVFC1-1P60608 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.56□□□□□ -2
ERVFC1-1P60608 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.56□□□□□ -2
ERVFC1-1P60608 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ERVFC1-1P60608 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
ERVFC1-1P60608 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ERVFC1-1P60608 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.55□□□□□ -2
ERVFC1-1P60608 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.55□□□□□ -2
ERVFC1-1P60608 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.55□□□□□ -2
ERVFC1-1P60608 RNU6-942P-201ENST00000363002 107 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 Y_RNA.276-201ENST00000364732 109 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 SNORA14A-201ENST00000364773 135 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 Y_RNA.307-201ENST00000365022 117 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 RNU6-898P-201ENST00000365627 104 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ERVFC1-1P60608 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.55□□□□□ -2
ERVFC1-1P60608 CD24P4-201ENST00000382840 243 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 RNU6-708P-201ENST00000384217 107 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 RNU6-658P-201ENST00000384606 106 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 Y_RNA.551-201ENST00000384661 102 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ERVFC1-1P60608 RNU6-700P-201ENST00000391043 107 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 RPL21P17-201ENST00000397467 475 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 U3.37-201ENST00000408528 213 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 Y_RNA.592-201ENST00000410274 109 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 RPS29P4-201ENST00000414733 161 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.55□□□□□ -2
ERVFC1-1P60608 AC007098.1-201ENST00000420122 367 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.55□□□□□ -2
ERVFC1-1P60608 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.55□□□□□ -2
ERVFC1-1P60608 FCF1P4-201ENST00000448326 183 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.55□□□□□ -2
ERVFC1-1P60608 MTATP6P7-201ENST00000453315 681 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 RPL7P49-201ENST00000471402 708 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 SNORA31.1-201ENST00000515993 133 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 SNORA31.5-201ENST00000516190 133 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 SNORA43.2-201ENST00000516652 128 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 SNORA31.18-201ENST00000517043 134 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 AC026403.1-201ENST00000518938 295 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 AC007458.1-201ENST00000542812 373 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.55□□□□□ -2
ERVFC1-1P60608 LINC00933-203ENST00000559812 219 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 AC090517.1-201ENST00000569307 266 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 AC125232.2-201ENST00000592457 143 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 U3.45-201ENST00000607547 219 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.55□□□□□ -2
ERVFC1-1P60608 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.55□□□□□ -2
ERVFC1-1P60608 AL159153.1-201ENST00000619688 317 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 AP000560.1-201ENST00000624150 1937 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.55□□□□□ -2
ERVFC1-1P60608 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ERVFC1-1P60608 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.55□□□□□ -2
ERVFC1-1P60608 FAM35BP-202ENST00000497389 3337 ntBASIC2.55□□□□□ -2
ERVFC1-1P60608 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.55□□□□□ -2
ERVFC1-1P60608 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.55□□□□□ -2
ERVFC1-1P60608 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ERVFC1-1P60608 Y_RNA.123-201ENST00000363338 102 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 RNU6-379P-201ENST00000363813 104 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.54□□□□□ -2
ERVFC1-1P60608 RNU1-73P-201ENST00000383971 164 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 SNORA51.11-201ENST00000384442 131 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 MT-TW-201ENST00000387382 68 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 MT-TR-201ENST00000387439 65 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 SNORA69.1-201ENST00000390904 137 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 RNA5SP38-201ENST00000410750 119 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.54□□□□□ -2
ERVFC1-1P60608 PRSS3P4-201ENST00000453323 162 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 RNA5SP310-201ENST00000459084 116 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.54□□□□□ -2
ERVFC1-1P60608 SNORA25.11-201ENST00000515935 105 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 RNU6-911P-201ENST00000516523 104 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.54□□□□□ -2
ERVFC1-1P60608 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.54□□□□□ -2
ERVFC1-1P60608 AL590705.4-201ENST00000532209 134 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AMZ2P1-203ENST00000565833 850 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.54□□□□□ -2
ERVFC1-1P60608 MIR5187-201ENST00000583479 76 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.54□□□□□ -2
ERVFC1-1P60608 AC024153.1-201ENST00000603103 365 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AC012468.1-201ENST00000604888 430 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 MTND4LP5-201ENST00000605152 292 ntBASIC2.54□□□□□ -2
ERVFC1-1P60608 AC062037.2-201ENST00000610137 73 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms