Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AC025465.3-201ENST00000510570 311 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC074344.1-201ENST00000512823 224 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU5F-2P-201ENST00000516066 82 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU6-415P-201ENST00000516252 97 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC106038.2-201ENST00000520706 568 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 COPS8P3-201ENST00000526024 482 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.5□□□□□ -2.17
EIF3EP60228 AL356057.1-201ENST00000533798 831 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC027807.1-201ENST00000559921 996 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC015720.1-201ENST00000565251 277 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC137800.2-201ENST00000574375 120 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 BNIP3P8-201ENST00000597863 560 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AL158827.2-201ENST00000602494 330 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.5□□□□□ -2.17
EIF3EP60228 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RN7SL853P-201ENST00000617250 223 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC130454.1-201ENST00000622948 401 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC011155.2-201ENST00000623202 216 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AC079248.2-201ENST00000623779 326 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AL691447.3-201ENST00000635020 330 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
EIF3EP60228 RNU6-105P-201ENST00000363909 104 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 RNU6-116P-201ENST00000384042 109 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 MIR544A-201ENST00000384855 91 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
EIF3EP60228 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.49□□□□□ -2.17
EIF3EP60228 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.49□□□□□ -2.17
EIF3EP60228 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
EIF3EP60228 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.49□□□□□ -2.17
EIF3EP60228 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 AC010099.3-201ENST00000423896 409 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 AL591043.1-201ENST00000432461 424 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 AC009961.2-201ENST00000435771 251 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 KATNBL1P3-201ENST00000443475 909 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.49□□□□□ -2.17
EIF3EP60228 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.49□□□□□ -2.17
EIF3EP60228 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.49□□□□□ -2.17
EIF3EP60228 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.49□□□□□ -2.17
EIF3EP60228 AC104136.1-201ENST00000512969 394 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 AC087883.1-201ENST00000551882 391 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.49□□□□□ -2.17
EIF3EP60228 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.49□□□□□ -2.17
EIF3EP60228 AC018889.1-201ENST00000605372 397 ntBASIC1.49□□□□□ -2.17
EIF3EP60228 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
EIF3EP60228 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.49□□□□□ -2.17
EIF3EP60228 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.49□□□□□ -2.17
EIF3EP60228 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
EIF3EP60228 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.48□□□□□ -2.17
EIF3EP60228 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
EIF3EP60228 RNU4-13P-201ENST00000364019 141 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
EIF3EP60228 RNU6-74P-201ENST00000384235 107 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 AL031577.2-201ENST00000404133 280 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 RN7SKP51-201ENST00000410781 304 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.48□□□□□ -2.17
EIF3EP60228 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.48□□□□□ -2.17
EIF3EP60228 AL669831.1-202ENST00000428504 417 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 MTND5P25-201ENST00000430499 799 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 GTF2IP13-201ENST00000438487 386 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 AC010095.1-201ENST00000443543 144 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.48□□□□□ -2.17
EIF3EP60228 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 snoU13.9-201ENST00000458927 103 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 FO393415.2-201ENST00000480085 343 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.48□□□□□ -2.17
EIF3EP60228 MTND1P22-201ENST00000510572 951 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.48□□□□□ -2.17
EIF3EP60228 RNU6-991P-201ENST00000516168 107 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 SNORD27.1-201ENST00000516319 72 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 RNU6-410P-201ENST00000517006 107 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.48□□□□□ -2.17
EIF3EP60228 AP000889.1-201ENST00000530968 660 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.48□□□□□ -2.17
EIF3EP60228 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.48□□□□□ -2.17
EIF3EP60228 AC104073.3-201ENST00000610942 955 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 AC097372.5-201ENST00000623665 376 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 AC008993.2-201ENST00000631744 806 ntBASIC1.48□□□□□ -2.17
EIF3EP60228 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
EIF3EP60228 RNU6-527P-201ENST00000363425 104 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 RNU6-553P-201ENST00000364047 96 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 SNORD32B-201ENST00000364460 84 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 Y_RNA.324-201ENST00000365165 102 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 Y_RNA.560-201ENST00000384689 102 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 MIR1261-201ENST00000408659 82 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 MTND3P17-201ENST00000416968 344 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 MTND1P30-201ENST00000441241 901 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 SNRPGP13-201ENST00000442212 177 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 MTND2P4-201ENST00000445034 1004 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 AC079781.2-201ENST00000446424 169 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 RNU7-125P-201ENST00000458760 62 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 RNU6-333P-201ENST00000459117 107 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 AC132942.1-201ENST00000486753 483 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 AC021146.2-201ENST00000504736 556 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 AC115990.1-201ENST00000526957 301 ntBASIC1.47□□□□□ -2.17
EIF3EP60228 AC098848.2-201ENST00000588023 330 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms