Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL133475.1-201ENST00000404414 305 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 EIF1P2-201ENST00000428233 350 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 AL445584.1-201ENST00000431451 330 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 AC016700.2-201ENST00000446011 156 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 SNORD105B-201ENST00000458770 79 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 SNORD127-201ENST00000458892 86 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 RNU6-1132P-201ENST00000459214 107 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.15□□□□□ -1.91
CLRN1P58418 AC107626.1-201ENST00000471084 183 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLRN1P58418 AL049830.2-201ENST00000480072 201 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 AC098869.1-201ENST00000481627 292 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 SNORD19.2-201ENST00000516978 73 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
CLRN1P58418 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.15□□□□□ -1.91
CLRN1P58418 AC106785.1-201ENST00000565935 262 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 AC096772.1-201ENST00000609146 564 ntBASIC3.15□□□□□ -1.91
CLRN1P58418 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.15□□□□□ -1.91
CLRN1P58418 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLRN1P58418 AC068647.1-201ENST00000489539 2265 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CLRN1P58418 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLRN1P58418 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLRN1P58418 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLRN1P58418 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLRN1P58418 AC092268.1-201ENST00000342691 405 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 Y_RNA.447-201ENST00000384184 113 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 RNU6-541P-201ENST00000384709 110 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 MIR554-201ENST00000384874 96 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 RNU2-38P-201ENST00000410856 79 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 BX679664.1-201ENST00000434429 253 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 snoU13.6-201ENST00000458785 104 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 U3.44-201ENST00000458938 192 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 RN7SL594P-201ENST00000470590 287 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 AC025465.3-201ENST00000510570 311 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 RNU6-1012P-201ENST00000516606 109 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 AC093023.1-201ENST00000547375 507 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 AC027288.2-201ENST00000553028 243 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 AC021231.3-201ENST00000558497 370 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
CLRN1P58418 MIR7851-201ENST00000610611 160 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 AC240442.1-201ENST00000616055 283 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 XIST_intron.1-201ENST00000619444 68 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 AC137590.2-201ENST00000619709 240 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 U4.6-201ENST00000621618 127 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 U6.104-201ENST00000637979 90 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLRN1P58418 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CLRN1P58418 AC010889.1-201ENST00000566193 2666 ntBASIC3.14□□□□□ -1.91
CLRN1P58418 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLRN1P58418 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.13□□□□□ -1.91
CLRN1P58418 OTUD4P1-201ENST00000237841 3067 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 MIR423-201ENST00000362201 94 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 Y_RNA.143-201ENST00000363520 106 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU6-879P-201ENST00000364328 108 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 Y_RNA.319-201ENST00000365138 92 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 Y_RNA.489-201ENST00000384410 101 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU6-748P-201ENST00000384648 107 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNA5SP213-201ENST00000391031 106 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 SNORD78.2-201ENST00000391076 69 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU1-139P-201ENST00000391307 165 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.13□□□□□ -1.91
CLRN1P58418 WARS2P1-201ENST00000429678 537 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.13□□□□□ -1.91
CLRN1P58418 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.13□□□□□ -1.91
CLRN1P58418 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.13□□□□□ -1.91
CLRN1P58418 AL031183.1-201ENST00000457667 207 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 SNORA31.1-201ENST00000515993 133 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU6-1114P-201ENST00000516022 107 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 SNORA31.5-201ENST00000516190 133 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 Y_RNA.680-201ENST00000516441 93 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU5B-3P-201ENST00000516601 115 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 SNORA70.18-201ENST00000516696 98 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU6-388P-201ENST00000517012 105 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU6-389P-201ENST00000517048 105 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNU1-45P-201ENST00000517191 141 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.13□□□□□ -1.91
CLRN1P58418 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.13□□□□□ -1.91
CLRN1P58418 AC023824.2-201ENST00000566185 400 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 AC136932.1-201ENST00000574771 208 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 MIR4659A-201ENST00000580269 81 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 AC073410.2-201ENST00000603240 332 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 RNVU1-4-201ENST00000612985 164 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.13□□□□□ -1.91
CLRN1P58418 AC011476.5-201ENST00000615594 130 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 AC034229.5-201ENST00000624258 185 ntBASIC3.13□□□□□ -1.91
CLRN1P58418 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLRN1P58418 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLRN1P58418 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLRN1P58418 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLRN1P58418 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLRN1P58418 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLRN1P58418 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.12□□□□□ -1.91
CLRN1P58418 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLRN1P58418 RNA5SP295-201ENST00000362655 121 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 Y_RNA.350-201ENST00000365409 98 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 RNU6-318P-201ENST00000384283 103 ntBASIC3.12□□□□□ -1.91
CLRN1P58418 MIR215-201ENST00000384858 110 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms