| BACE1 | P56817 | AC079598.5-201 | ENST00000547460 | 117 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC025043.1-201 | ENST00000558047 | 625 nt | TSL 2 BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RPS15AP11-201 | ENST00000594193 | 385 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | ZNF788-206 | ENST00000596883 | 692 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC098679.4-201 | ENST00000624241 | 654 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC109471.3-201 | ENST00000625219 | 233 nt | TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | FER-210 | ENST00000628534 | 558 nt | TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RBBP8P1-201 | ENST00000449447 | 1844 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | PRKACB-204 | ENST00000370685 | 4481 nt | APPRIS P4 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC009975.1-201 | ENST00000634588 | 2698 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC130466.1-201 | ENST00000636354 | 4683 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RRAS2-211 | ENST00000537760 | 2034 nt | TSL 2 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | ZBTB6-201 | ENST00000373659 | 4106 nt | APPRIS P1 TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RGPD1-204 | ENST00000559485 | 5247 nt | APPRIS P2 TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | Y_RNA.6-201 | ENST00000362350 | 114 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU4-20P-201 | ENST00000365601 | 151 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | MIR514A2-201 | ENST00000385131 | 88 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | MIR514A3-201 | ENST00000385132 | 88 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AL513008.1-201 | ENST00000412701 | 161 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC074117.2-201 | ENST00000417130 | 397 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | USP9YP27-201 | ENST00000418455 | 438 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC012370.1-201 | ENST00000419244 | 530 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | LINC02541-201 | ENST00000427157 | 327 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | MCHR2-AS1-203 | ENST00000451220 | 429 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC023141.11-201 | ENST00000508864 | 202 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | CYCSP27-201 | ENST00000527643 | 293 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC109635.3-201 | ENST00000529536 | 185 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC068205.1-204 | ENST00000532989 | 481 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC044840.1-201 | ENST00000577641 | 472 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC068790.6-201 | ENST00000602558 | 258 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC021646.1-201 | ENST00000605469 | 484 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AL121917.1-203 | ENST00000605534 | 577 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AL021997.1-201 | ENST00000605757 | 193 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC004492.1-201 | ENST00000607036 | 742 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | DISC2.1-201 | ENST00000612827 | 205 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | U4.7-201 | ENST00000638126 | 106 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | Z75746.1-201 | ENST00000440243 | 2080 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | SCN7A-201 | ENST00000409855 | 7183 nt | APPRIS P1 TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC111000.4-202 | ENST00000505646 | 2648 nt | TSL 2 BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | ZNF644-212 | ENST00000621077 | 2056 nt | TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-37P-201 | ENST00000362692 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-11P-201 | ENST00000364234 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-25P-201 | ENST00000383873 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-1-201 | ENST00000383898 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | Y_RNA.402-201 | ENST00000383972 | 102 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-48P-201 | ENST00000384161 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-36P-201 | ENST00000384172 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-4P-201 | ENST00000384205 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-5P-201 | ENST00000384238 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-622P-201 | ENST00000384272 | 103 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-3P-201 | ENST00000384314 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-16P-201 | ENST00000384385 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-15P-201 | ENST00000384534 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-2-201 | ENST00000384627 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-29P-201 | ENST00000384637 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | Y_RNA.554-201 | ENST00000384672 | 102 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-9-201 | ENST00000384776 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-33P-201 | ENST00000384793 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNA5SP219-201 | ENST00000390940 | 113 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AL133475.1-201 | ENST00000404414 | 305 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | U6atac.2-201 | ENST00000408644 | 118 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-1068P-201 | ENST00000410958 | 103 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | POLHP1-201 | ENST00000411806 | 470 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | MTCO1P20-201 | ENST00000425366 | 358 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RPL30P4-201 | ENST00000429309 | 333 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | MTND3P16-201 | ENST00000452205 | 344 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AL160162.1-201 | ENST00000456715 | 442 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC080013.2-201 | ENST00000460866 | 323 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC112771.1-201 | ENST00000463581 | 102 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-189P-201 | ENST00000516120 | 101 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | SNORA31.23-201 | ENST00000517219 | 133 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC109479.2-201 | ENST00000517842 | 174 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC127894.1-201 | ENST00000548266 | 851 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC136619.2-201 | ENST00000563361 | 631 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | MIR4446-201 | ENST00000578505 | 67 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC105245.1-201 | ENST00000581934 | 244 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-6P-201 | ENST00000606623 | 107 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC069294.1-201 | ENST00000608397 | 350 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC103705.1-201 | ENST00000619013 | 241 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC024581.2-201 | ENST00000619986 | 252 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | KPNA5-202 | ENST00000368564 | 11311 nt | APPRIS P1 TSL 1 (best) BASIC | 2.23 | □□□□□ -2.05 | | |
| BACE1 | P56817 | OR4G1P-203 | ENST00000641984 | 1631 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-1010P-201 | ENST00000362757 | 107 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | SNORD114-19-201 | ENST00000363072 | 75 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNY4P14-201 | ENST00000363656 | 96 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNY3P3-201 | ENST00000363816 | 102 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | MIR218-1-201 | ENST00000384999 | 110 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-220P-201 | ENST00000390919 | 107 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNU6-192P-201 | ENST00000391253 | 100 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | RNA5SP390-201 | ENST00000410191 | 113 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | SNORD56-201 | ENST00000413522 | 71 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC093157.2-201 | ENST00000414686 | 671 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AL162726.4-201 | ENST00000422010 | 673 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC003989.2-201 | ENST00000440224 | 169 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | LINC02041-201 | ENST00000440726 | 246 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AP001025.1-201 | ENST00000486139 | 332 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | AC104564.1-201 | ENST00000493028 | 407 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | Y_RNA.654-201 | ENST00000497848 | 106 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| BACE1 | P56817 | SNORA14.1-201 | ENST00000516113 | 141 nt | BASIC | 2.22 | □□□□□ -2.05 | | |