Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU6-1231P-201ENST00000517185 103 ntBASIC3□□□□□ -1.93
SUMO3P55854 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3□□□□□ -1.93
SUMO3P55854 AL442663.2-201ENST00000554385 511 ntBASIC3□□□□□ -1.93
SUMO3P55854 AC027176.1-201ENST00000560204 514 ntBASIC3□□□□□ -1.93
SUMO3P55854 AC104581.2-201ENST00000572227 430 ntBASIC3□□□□□ -1.93
SUMO3P55854 MIR4429-201ENST00000580105 73 ntBASIC3□□□□□ -1.93
SUMO3P55854 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3□□□□□ -1.93
SUMO3P55854 AC137590.2-201ENST00000619709 240 ntBASIC3□□□□□ -1.93
SUMO3P55854 SNORD98-201ENST00000636377 67 ntBASIC3□□□□□ -1.93
SUMO3P55854 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SUMO3P55854 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SUMO3P55854 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SUMO3P55854 Y_RNA.5-201ENST00000362334 102 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 RNA5SP72-201ENST00000364442 117 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 Y_RNA.252-201ENST00000364556 101 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 RNU4-56P-201ENST00000364700 142 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 Y_RNA.445-201ENST00000384168 102 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 RNU6-700P-201ENST00000391043 107 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 MIR548P-201ENST00000408336 84 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 U6atac.2-201ENST00000408644 118 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 RNA5SP229-201ENST00000410809 99 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 AC018865.2-201ENST00000423631 129 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 AC008267.5-201ENST00000424928 265 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.99□□□□□ -1.93
SUMO3P55854 AC099799.1-201ENST00000439809 192 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.99□□□□□ -1.93
SUMO3P55854 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.99□□□□□ -1.93
SUMO3P55854 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.99□□□□□ -1.93
SUMO3P55854 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.99□□□□□ -1.93
SUMO3P55854 SNORA25.11-201ENST00000515935 105 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 RNU6-699P-201ENST00000517081 110 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.99□□□□□ -1.93
SUMO3P55854 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.99□□□□□ -1.93
SUMO3P55854 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.99□□□□□ -1.93
SUMO3P55854 SNRPGP17-201ENST00000603780 214 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 AC084757.4-201ENST00000616350 526 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 MIR7975-201ENST00000619350 68 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.99□□□□□ -1.93
SUMO3P55854 FAM35CP-201ENST00000554755 2470 ntBASIC2.99□□□□□ -1.93
SUMO3P55854 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SUMO3P55854 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SUMO3P55854 AC138915.1-201ENST00000565427 1685 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SUMO3P55854 RNU1-70P-201ENST00000362618 164 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 RNU6-99P-201ENST00000364721 107 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 MIR670-201ENST00000390142 98 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 AL138885.1-201ENST00000405921 675 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 RNA5SP494-201ENST00000410653 129 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 AC012306.1-201ENST00000423267 114 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.98□□□□□ -1.93
SUMO3P55854 snoU13.30-201ENST00000458951 104 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 SNORA31.16-201ENST00000516773 139 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.98□□□□□ -1.93
SUMO3P55854 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.98□□□□□ -1.93
SUMO3P55854 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.98□□□□□ -1.93
SUMO3P55854 AC020661.2-201ENST00000560114 134 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 MIR1254-2-201ENST00000579553 63 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 AL078605.1-201ENST00000603529 500 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 AC004832.5-201ENST00000608677 401 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.98□□□□□ -1.93
SUMO3P55854 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.98□□□□□ -1.93
SUMO3P55854 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.98□□□□□ -1.93
SUMO3P55854 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.98□□□□□ -1.93
SUMO3P55854 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.98□□□□□ -1.93
SUMO3P55854 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SUMO3P55854 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SUMO3P55854 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SUMO3P55854 AC093908.1-201ENST00000623125 8092 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 MAPK10-266ENST00000641066 6555 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.97□□□□□ -1.93
SUMO3P55854 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SUMO3P55854 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SUMO3P55854 SNORA71.3-201ENST00000362582 128 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 RNU6-1159P-201ENST00000362933 107 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 SNORD115-32-201ENST00000364079 82 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 Y_RNA.428-201ENST00000384078 102 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 SNORA36A-201ENST00000384221 132 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 SNORA12.2-201ENST00000391040 156 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 RNU6-1156P-201ENST00000410365 100 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.97□□□□□ -1.93
SUMO3P55854 AC007098.1-201ENST00000420122 367 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.97□□□□□ -1.93
SUMO3P55854 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SUMO3P55854 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.97□□□□□ -1.93
SUMO3P55854 RPS3P1-201ENST00000456781 192 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 AC087477.1-201ENST00000465747 340 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 AF186996.7-201ENST00000492781 209 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 AC021146.2-201ENST00000504736 556 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 SNORD116.3-201ENST00000517176 78 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 NDUFB9P3-201ENST00000521269 501 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.97□□□□□ -1.93
SUMO3P55854 MIR3923-201ENST00000579521 83 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 AC010928.2-201ENST00000588017 287 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 Z98751.3-201ENST00000604447 521 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 RMST_6.1-201ENST00000611980 203 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 AC012314.7-201ENST00000619693 93 ntBASIC2.97□□□□□ -1.93
SUMO3P55854 AC091925.1-201ENST00000623204 462 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms