Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AL122001.1-201ENST00000457027 370 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 snoU13.30-201ENST00000458951 104 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 RAP1BP2-201ENST00000478270 544 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AC005840.1-201ENST00000498412 377 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.45□□□□□ -2.34
FOXA3P55318 TRMT112P2-201ENST00000512910 132 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AC091163.3-201ENST00000518269 1144 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AP003355.1-201ENST00000518956 587 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.45□□□□□ -2.34
FOXA3P55318 AC011604.1-201ENST00000545978 196 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.45□□□□□ -2.34
FOXA3P55318 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.45□□□□□ -2.34
FOXA3P55318 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.45□□□□□ -2.34
FOXA3P55318 MTND3P13-201ENST00000574391 343 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.45□□□□□ -2.34
FOXA3P55318 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.45□□□□□ -2.34
FOXA3P55318 AL365204.3-201ENST00000612448 685 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AL354696.1-201ENST00000614652 497 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 MIR6835-201ENST00000621552 64 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.45□□□□□ -2.34
FOXA3P55318 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.45□□□□□ -2.34
FOXA3P55318 RNU6-1019P-201ENST00000364424 107 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 MIR10A-201ENST00000385043 110 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 SNORA12-201ENST00000391162 147 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.44□□□□□ -2.34
FOXA3P55318 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.44□□□□□ -2.34
FOXA3P55318 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.44□□□□□ -2.34
FOXA3P55318 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 snoU13.27-201ENST00000459278 104 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.44□□□□□ -2.34
FOXA3P55318 MTND2P33-201ENST00000506452 1031 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AC119751.4-201ENST00000507498 357 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 Y_RNA.689-201ENST00000516589 107 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 RNU6-677P-201ENST00000516914 101 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 RNU6-1028P-201ENST00000517164 93 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AC090142.3-201ENST00000519012 385 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 MIR4498-201ENST00000577599 66 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AP001004.1-201ENST00000582468 324 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 MIR4298-201ENST00000584380 73 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 BNIP3P16-201ENST00000589779 534 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.44□□□□□ -2.34
FOXA3P55318 MTATP6P2-201ENST00000603319 678 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AL590095.2-201ENST00000604136 117 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 RNU6-87P-201ENST00000607561 108 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AC024940.5-201ENST00000622889 474 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AC068880.4-201ENST00000623082 495 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 MIR6767-201ENST00000637302 66 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 AC092104.1-201ENST00000497346 1441 ntBASIC0.44□□□□□ -2.34
FOXA3P55318 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
FOXA3P55318 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
FOXA3P55318 MIR200A-201ENST00000384875 90 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 SNORD12-201ENST00000391002 90 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 RPS3AP36-201ENST00000398190 775 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AL356776.1-201ENST00000406574 447 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 RAP1BP3-201ENST00000407180 549 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AC114482.1-201ENST00000418010 247 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 USP9YP21-201ENST00000420603 432 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AC063976.4-201ENST00000421971 163 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.43□□□□□ -2.34
FOXA3P55318 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.43□□□□□ -2.34
FOXA3P55318 AC069257.2-201ENST00000441819 155 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 SNRPEP8-201ENST00000442866 260 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 MTND1P18-201ENST00000448191 573 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AC108059.3-201ENST00000456388 214 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.43□□□□□ -2.34
FOXA3P55318 TOMM22P6-201ENST00000465035 409 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.43□□□□□ -2.34
FOXA3P55318 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.43□□□□□ -2.34
FOXA3P55318 AC108078.2-201ENST00000510750 236 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 MTCO3P27-201ENST00000514397 196 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 RNU5F-2P-201ENST00000516066 82 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 Y_RNA.687-201ENST00000516558 91 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 BNIP3P6-201ENST00000549284 499 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AL451064.1-201ENST00000607718 471 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AC131235.4-201ENST00000609288 620 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 AC084824.5-201ENST00000612009 413 ntBASIC0.43□□□□□ -2.34
FOXA3P55318 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.43□□□□□ -2.34
FOXA3P55318 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.43□□□□□ -2.34
FOXA3P55318 Y_RNA.311-201ENST00000365068 96 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 MIR520E-201ENST00000384867 87 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AP000275.1-201ENST00000411943 390 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AL627311.1-201ENST00000431514 115 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AC099677.2-201ENST00000436385 175 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.42□□□□□ -2.34
FOXA3P55318 AC006026.2-201ENST00000457376 180 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AC113347.3-201ENST00000509113 148 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.42□□□□□ -2.34
FOXA3P55318 SNORA31.4-201ENST00000516049 129 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 SNORA43.2-201ENST00000516652 128 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AC087894.1-201ENST00000538359 518 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AC004812.1-201ENST00000540773 146 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AC091135.1-201ENST00000585943 307 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 BNIP3P26-201ENST00000600827 554 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 VN1R82P-201ENST00000601481 356 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 AL136363.2-201ENST00000604173 851 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
FOXA3P55318 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.42□□□□□ -2.34
FOXA3P55318 SCARNA4-202ENST00000625402 129 ntBASIC0.42□□□□□ -2.34
FOXA3P55318 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms