Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC023043.3-201ENST00000593113 385 ntBASIC3.1□□□□□ -1.91
COPB1P53618 AC024153.1-201ENST00000603103 365 ntBASIC3.1□□□□□ -1.91
COPB1P53618 AC018889.1-201ENST00000605372 397 ntBASIC3.1□□□□□ -1.91
COPB1P53618 AC008962.1-201ENST00000605729 304 ntBASIC3.1□□□□□ -1.91
COPB1P53618 MIR7106-201ENST00000612419 65 ntBASIC3.1□□□□□ -1.91
COPB1P53618 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.1□□□□□ -1.91
COPB1P53618 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COPB1P53618 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
COPB1P53618 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.91
COPB1P53618 AL161431.1-201ENST00000618966 4205 ntBASIC3.09□□□□□ -1.91
COPB1P53618 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COPB1P53618 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COPB1P53618 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
COPB1P53618 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COPB1P53618 RNU6-336P-201ENST00000364891 107 ntBASIC3.09□□□□□ -1.91
COPB1P53618 RNU6-898P-201ENST00000365627 104 ntBASIC3.09□□□□□ -1.91
COPB1P53618 RNU6-1032P-201ENST00000384100 107 ntBASIC3.09□□□□□ -1.91
COPB1P53618 RNY1P14-201ENST00000384426 108 ntBASIC3.09□□□□□ -1.91
COPB1P53618 RNU6-1106P-201ENST00000390845 107 ntBASIC3.09□□□□□ -1.91
COPB1P53618 AL591034.2-201ENST00000402839 359 ntBASIC3.09□□□□□ -1.91
COPB1P53618 AL590664.1-201ENST00000448065 339 ntBASIC3.09□□□□□ -1.91
COPB1P53618 GSTA11P-201ENST00000452866 669 ntBASIC3.09□□□□□ -1.91
COPB1P53618 RPS29P27-201ENST00000463711 170 ntBASIC3.09□□□□□ -1.91
COPB1P53618 HMGN2P13-201ENST00000476476 274 ntBASIC3.09□□□□□ -1.91
COPB1P53618 AC022447.4-201ENST00000504053 364 ntBASIC3.09□□□□□ -1.91
COPB1P53618 AK3P2-201ENST00000507976 429 ntBASIC3.09□□□□□ -1.91
COPB1P53618 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.09□□□□□ -1.91
COPB1P53618 ACA59.1-201ENST00000515966 143 ntBASIC3.09□□□□□ -1.91
COPB1P53618 SNORA9.3-201ENST00000516383 129 ntBASIC3.09□□□□□ -1.91
COPB1P53618 SNORA43.2-201ENST00000516652 128 ntBASIC3.09□□□□□ -1.91
COPB1P53618 RNU6-307P-201ENST00000516743 106 ntBASIC3.09□□□□□ -1.91
COPB1P53618 RNU6-1137P-201ENST00000517073 99 ntBASIC3.09□□□□□ -1.91
COPB1P53618 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.09□□□□□ -1.91
COPB1P53618 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
COPB1P53618 AC107016.2-201ENST00000547968 190 ntBASIC3.09□□□□□ -1.91
COPB1P53618 AL391261.3-201ENST00000557194 520 ntBASIC3.09□□□□□ -1.91
COPB1P53618 SUB1P3-201ENST00000564581 315 ntBASIC3.09□□□□□ -1.91
COPB1P53618 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.09□□□□□ -1.91
COPB1P53618 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.09□□□□□ -1.91
COPB1P53618 AC005014.2-201ENST00000607795 599 ntBASIC3.09□□□□□ -1.91
COPB1P53618 MIR6076-201ENST00000617521 113 ntBASIC3.09□□□□□ -1.91
COPB1P53618 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.09□□□□□ -1.92
COPB1P53618 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COPB1P53618 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COPB1P53618 Y_RNA.145-201ENST00000363527 102 ntBASIC3.08□□□□□ -1.92
COPB1P53618 RNU6-639P-201ENST00000384074 107 ntBASIC3.08□□□□□ -1.92
COPB1P53618 Y_RNA.510-201ENST00000384511 114 ntBASIC3.08□□□□□ -1.92
COPB1P53618 AL031121.1-201ENST00000406553 254 ntBASIC3.08□□□□□ -1.92
COPB1P53618 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.08□□□□□ -1.92
COPB1P53618 BPY2DP-201ENST00000422208 265 ntBASIC3.08□□□□□ -1.92
COPB1P53618 AC008267.5-201ENST00000424928 265 ntBASIC3.08□□□□□ -1.92
COPB1P53618 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
COPB1P53618 AC068781.1-201ENST00000488231 618 ntBASIC3.08□□□□□ -1.92
COPB1P53618 AC091826.1-201ENST00000514065 313 ntBASIC3.08□□□□□ -1.92
COPB1P53618 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
COPB1P53618 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
COPB1P53618 AP005902.1-201ENST00000521358 186 ntBASIC3.08□□□□□ -1.92
COPB1P53618 CBX3P8-201ENST00000532412 525 ntBASIC3.08□□□□□ -1.92
COPB1P53618 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.08□□□□□ -1.92
COPB1P53618 MIR3605-201ENST00000583214 100 ntBASIC3.08□□□□□ -1.92
COPB1P53618 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
COPB1P53618 MIR8076-201ENST00000611401 83 ntBASIC3.08□□□□□ -1.92
COPB1P53618 AC004852.3-201ENST00000614131 326 ntBASIC3.08□□□□□ -1.92
COPB1P53618 AC007485.1-201ENST00000616755 206 ntBASIC3.08□□□□□ -1.92
COPB1P53618 CDC27P3-201ENST00000635418 1910 ntBASIC3.08□□□□□ -1.92
COPB1P53618 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
COPB1P53618 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.08□□□□□ -1.92
COPB1P53618 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COPB1P53618 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.07□□□□□ -1.92
COPB1P53618 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.07□□□□□ -1.92
COPB1P53618 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.07□□□□□ -1.92
COPB1P53618 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
COPB1P53618 Y_RNA.48-201ENST00000362710 103 ntBASIC3.07□□□□□ -1.92
COPB1P53618 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.07□□□□□ -1.92
COPB1P53618 RNU6-933P-201ENST00000384424 107 ntBASIC3.07□□□□□ -1.92
COPB1P53618 RNU1-101P-201ENST00000391171 127 ntBASIC3.07□□□□□ -1.92
COPB1P53618 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.07□□□□□ -1.92
COPB1P53618 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.07□□□□□ -1.92
COPB1P53618 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.07□□□□□ -1.92
COPB1P53618 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.07□□□□□ -1.92
COPB1P53618 BTF3P15-201ENST00000455606 336 ntBASIC3.07□□□□□ -1.92
COPB1P53618 U8.21-201ENST00000459536 136 ntBASIC3.07□□□□□ -1.92
COPB1P53618 AC133134.1-201ENST00000466800 359 ntBASIC3.07□□□□□ -1.92
COPB1P53618 FO393415.2-201ENST00000480085 343 ntBASIC3.07□□□□□ -1.92
COPB1P53618 AC097462.2-201ENST00000504623 481 ntBASIC3.07□□□□□ -1.92
COPB1P53618 RPL23AP94-201ENST00000512518 302 ntBASIC3.07□□□□□ -1.92
COPB1P53618 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.07□□□□□ -1.92
COPB1P53618 RNU6-612P-201ENST00000516909 102 ntBASIC3.07□□□□□ -1.92
COPB1P53618 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.07□□□□□ -1.92
COPB1P53618 AP004607.1-201ENST00000524456 203 ntBASIC3.07□□□□□ -1.92
COPB1P53618 MIR5696-201ENST00000578474 85 ntBASIC3.07□□□□□ -1.92
COPB1P53618 BNIP3P16-201ENST00000589779 534 ntBASIC3.07□□□□□ -1.92
COPB1P53618 VN1R107P-201ENST00000601784 209 ntBASIC3.07□□□□□ -1.92
COPB1P53618 AL158827.2-201ENST00000602494 330 ntBASIC3.07□□□□□ -1.92
COPB1P53618 MTND4LP5-201ENST00000605152 292 ntBASIC3.07□□□□□ -1.92
COPB1P53618 AC093732.2-201ENST00000607950 274 ntBASIC3.07□□□□□ -1.92
COPB1P53618 AC083806.3-201ENST00000614016 455 ntBASIC3.07□□□□□ -1.92
COPB1P53618 AL691447.3-201ENST00000635020 330 ntBASIC3.07□□□□□ -1.92
COPB1P53618 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.07□□□□□ -1.92
COPB1P53618 MTND4P1-201ENST00000457501 1466 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms