Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.2□□□□□ -1.74
USP11P51784 AC117440.1-201ENST00000474107 571 ntBASIC4.2□□□□□ -1.74
USP11P51784 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.2□□□□□ -1.74
USP11P51784 SNORA43.2-201ENST00000516652 128 ntBASIC4.2□□□□□ -1.74
USP11P51784 RNU6-1073P-201ENST00000517182 106 ntBASIC4.2□□□□□ -1.74
USP11P51784 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.2□□□□□ -1.74
USP11P51784 AC084757.4-201ENST00000616350 526 ntBASIC4.2□□□□□ -1.74
USP11P51784 AC073349.3-201ENST00000617616 186 ntBASIC4.2□□□□□ -1.74
USP11P51784 AC039056.2-201ENST00000622261 511 ntBASIC4.2□□□□□ -1.74
USP11P51784 AC112200.1-201ENST00000625015 234 ntBASIC4.2□□□□□ -1.74
USP11P51784 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
USP11P51784 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.2□□□□□ -1.74
USP11P51784 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
USP11P51784 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP11P51784 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP11P51784 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP11P51784 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.19□□□□□ -1.74
USP11P51784 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.19□□□□□ -1.74
USP11P51784 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP11P51784 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.19□□□□□ -1.74
USP11P51784 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP11P51784 RNU6-1175P-201ENST00000365200 107 ntBASIC4.19□□□□□ -1.74
USP11P51784 Z98749.2-208ENST00000381646 500 ntBASIC4.19□□□□□ -1.74
USP11P51784 RNU6-514P-201ENST00000384208 107 ntBASIC4.19□□□□□ -1.74
USP11P51784 U8.10-201ENST00000384260 133 ntBASIC4.19□□□□□ -1.74
USP11P51784 MIR329-1-201ENST00000385028 80 ntBASIC4.19□□□□□ -1.74
USP11P51784 Y_RNA.580-201ENST00000391004 95 ntBASIC4.19□□□□□ -1.74
USP11P51784 RNU6-131P-201ENST00000391144 107 ntBASIC4.19□□□□□ -1.74
USP11P51784 RNU2-68P-201ENST00000410878 191 ntBASIC4.19□□□□□ -1.74
USP11P51784 RNU6-1001P-201ENST00000411265 100 ntBASIC4.19□□□□□ -1.74
USP11P51784 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.19□□□□□ -1.74
USP11P51784 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.19□□□□□ -1.74
USP11P51784 WARS2P1-201ENST00000429678 537 ntBASIC4.19□□□□□ -1.74
USP11P51784 SETP5-201ENST00000437270 562 ntBASIC4.19□□□□□ -1.74
USP11P51784 Z82210.1-201ENST00000440037 231 ntBASIC4.19□□□□□ -1.74
USP11P51784 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.19□□□□□ -1.74
USP11P51784 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.19□□□□□ -1.74
USP11P51784 AL358232.1-201ENST00000448030 501 ntBASIC4.19□□□□□ -1.74
USP11P51784 AL133547.1-201ENST00000448546 220 ntBASIC4.19□□□□□ -1.74
USP11P51784 snoU13.24-201ENST00000458998 104 ntBASIC4.19□□□□□ -1.74
USP11P51784 HMGB1P22-201ENST00000505315 124 ntBASIC4.19□□□□□ -1.74
USP11P51784 RNU6-479P-201ENST00000516348 105 ntBASIC4.19□□□□□ -1.74
USP11P51784 RNU1-95P-201ENST00000516357 160 ntBASIC4.19□□□□□ -1.74
USP11P51784 RNU1-128P-201ENST00000516704 160 ntBASIC4.19□□□□□ -1.74
USP11P51784 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.19□□□□□ -1.74
USP11P51784 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.19□□□□□ -1.74
USP11P51784 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.19□□□□□ -1.74
USP11P51784 UBL5P4-201ENST00000562584 236 ntBASIC4.19□□□□□ -1.74
USP11P51784 CYCSP39-201ENST00000565821 309 ntBASIC4.19□□□□□ -1.74
USP11P51784 MIR3921-201ENST00000577308 85 ntBASIC4.19□□□□□ -1.74
USP11P51784 AC005828.6-201ENST00000606610 232 ntBASIC4.19□□□□□ -1.74
USP11P51784 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.19□□□□□ -1.74
USP11P51784 AC005296.1-201ENST00000616145 209 ntBASIC4.19□□□□□ -1.74
USP11P51784 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.19□□□□□ -1.74
USP11P51784 MIR6075-201ENST00000620782 95 ntBASIC4.19□□□□□ -1.74
USP11P51784 CR392039.5-201ENST00000623201 510 ntBASIC4.19□□□□□ -1.74
USP11P51784 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.19□□□□□ -1.74
USP11P51784 AP000553.6-201ENST00000641242 118 ntBASIC4.19□□□□□ -1.74
USP11P51784 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP11P51784 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
USP11P51784 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.19□□□□□ -1.74
USP11P51784 AL359693.1-201ENST00000614959 2407 ntBASIC4.19□□□□□ -1.74
USP11P51784 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP11P51784 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP11P51784 Y_RNA.217-201ENST00000364214 105 ntBASIC4.18□□□□□ -1.74
USP11P51784 RNA5SP51-201ENST00000364750 119 ntBASIC4.18□□□□□ -1.74
USP11P51784 SNORA29-201ENST00000384183 140 ntBASIC4.18□□□□□ -1.74
USP11P51784 RNU6-1145P-201ENST00000384246 107 ntBASIC4.18□□□□□ -1.74
USP11P51784 RPL21P17-201ENST00000397467 475 ntBASIC4.18□□□□□ -1.74
USP11P51784 RNA5SP44-201ENST00000410446 133 ntBASIC4.18□□□□□ -1.74
USP11P51784 AL035423.1-201ENST00000420331 213 ntBASIC4.18□□□□□ -1.74
USP11P51784 RPL27AP8-201ENST00000424277 446 ntBASIC4.18□□□□□ -1.74
USP11P51784 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.18□□□□□ -1.74
USP11P51784 snoU13.4-201ENST00000458916 104 ntBASIC4.18□□□□□ -1.74
USP11P51784 Y_RNA.641-201ENST00000459414 105 ntBASIC4.18□□□□□ -1.74
USP11P51784 RPL23AP62-201ENST00000463396 453 ntBASIC4.18□□□□□ -1.74
USP11P51784 AC140059.1-201ENST00000489238 361 ntBASIC4.18□□□□□ -1.74
USP11P51784 AL391261.3-201ENST00000557194 520 ntBASIC4.18□□□□□ -1.74
USP11P51784 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.18□□□□□ -1.74
USP11P51784 AC024153.1-201ENST00000603103 365 ntBASIC4.18□□□□□ -1.74
USP11P51784 AC136601.2-201ENST00000604356 474 ntBASIC4.18□□□□□ -1.74
USP11P51784 SCARNA4-202ENST00000625402 129 ntBASIC4.18□□□□□ -1.74
USP11P51784 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.18□□□□□ -1.74
USP11P51784 AC012442.3-202ENST00000636742 206 ntBASIC4.18□□□□□ -1.74
USP11P51784 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.18□□□□□ -1.74
USP11P51784 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
USP11P51784 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.18□□□□□ -1.74
USP11P51784 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP11P51784 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP11P51784 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP11P51784 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP11P51784 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP11P51784 RNA5SP124-201ENST00000362739 110 ntBASIC4.17□□□□□ -1.74
USP11P51784 RNU5B-2P-201ENST00000363036 113 ntBASIC4.17□□□□□ -1.74
USP11P51784 RNA5SP197-201ENST00000363357 119 ntBASIC4.17□□□□□ -1.74
USP11P51784 RNU6-527P-201ENST00000363425 104 ntBASIC4.17□□□□□ -1.74
USP11P51784 SNORA22C-201ENST00000384614 134 ntBASIC4.17□□□□□ -1.74
USP11P51784 MIR200C-201ENST00000384980 68 ntBASIC4.17□□□□□ -1.74
USP11P51784 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.17□□□□□ -1.74
USP11P51784 MTHFD2P2-201ENST00000407725 247 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms