Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MRE11P49959 RPL9P7-201ENST00000330965 580 ntBASIC3.74□□□□□ -1.81
MRE11P49959 RNY3P11-201ENST00000364153 102 ntBASIC3.74□□□□□ -1.81
MRE11P49959 Y_RNA.533-201ENST00000384596 114 ntBASIC3.74□□□□□ -1.81
MRE11P49959 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.74□□□□□ -1.81
MRE11P49959 RNU6-847P-201ENST00000411115 108 ntBASIC3.74□□□□□ -1.81
MRE11P49959 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.74□□□□□ -1.81
MRE11P49959 PGBD4P6-201ENST00000421501 610 ntBASIC3.74□□□□□ -1.81
MRE11P49959 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.74□□□□□ -1.81
MRE11P49959 AL356867.1-201ENST00000429623 299 ntBASIC3.74□□□□□ -1.81
MRE11P49959 AL513043.1-201ENST00000439124 535 ntBASIC3.74□□□□□ -1.81
MRE11P49959 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.74□□□□□ -1.81
MRE11P49959 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.74□□□□□ -1.81
MRE11P49959 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.74□□□□□ -1.81
MRE11P49959 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.74□□□□□ -1.81
MRE11P49959 AL583843.1-201ENST00000456070 346 ntBASIC3.74□□□□□ -1.81
MRE11P49959 RPL9P9-202ENST00000466501 579 ntBASIC3.74□□□□□ -1.81
MRE11P49959 RNU7-4P-201ENST00000516961 62 ntBASIC3.74□□□□□ -1.81
MRE11P49959 RNA5SP290-201ENST00000517133 127 ntBASIC3.74□□□□□ -1.81
MRE11P49959 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.74□□□□□ -1.81
MRE11P49959 AC040926.1-201ENST00000530195 238 ntBASIC3.74□□□□□ -1.81
MRE11P49959 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.74□□□□□ -1.81
MRE11P49959 HMGB1P14-201ENST00000557424 591 ntBASIC3.74□□□□□ -1.81
MRE11P49959 MIR5680-201ENST00000577577 84 ntBASIC3.74□□□□□ -1.81
MRE11P49959 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.74□□□□□ -1.81
MRE11P49959 AC009314.1-201ENST00000603871 304 ntBASIC3.74□□□□□ -1.81
MRE11P49959 uc_338.1-201ENST00000612113 180 ntBASIC3.74□□□□□ -1.81
MRE11P49959 AL442067.1-201ENST00000613261 223 ntBASIC3.74□□□□□ -1.81
MRE11P49959 AL137790.1-201ENST00000634283 177 ntBASIC3.74□□□□□ -1.81
MRE11P49959 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
MRE11P49959 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MRE11P49959 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MRE11P49959 AC103988.1-201ENST00000566382 2177 ntBASIC3.73□□□□□ -1.81
MRE11P49959 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.73□□□□□ -1.81
MRE11P49959 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.73□□□□□ -1.81
MRE11P49959 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MRE11P49959 RNU6-827P-201ENST00000365553 106 ntBASIC3.73□□□□□ -1.81
MRE11P49959 RPL21P1-201ENST00000399532 476 ntBASIC3.73□□□□□ -1.81
MRE11P49959 MIR887-201ENST00000401258 79 ntBASIC3.73□□□□□ -1.81
MRE11P49959 MIR1290-201ENST00000408735 78 ntBASIC3.73□□□□□ -1.81
MRE11P49959 U3.42-201ENST00000408746 214 ntBASIC3.73□□□□□ -1.81
MRE11P49959 RNU2-33P-201ENST00000410344 192 ntBASIC3.73□□□□□ -1.81
MRE11P49959 Y_RNA.623-201ENST00000411128 95 ntBASIC3.73□□□□□ -1.81
MRE11P49959 AC007919.1-201ENST00000429380 217 ntBASIC3.73□□□□□ -1.81
MRE11P49959 DYNLT3P2-201ENST00000442517 295 ntBASIC3.73□□□□□ -1.81
MRE11P49959 OSTCP8-201ENST00000445117 448 ntBASIC3.73□□□□□ -1.81
MRE11P49959 PCNPP5-201ENST00000452246 481 ntBASIC3.73□□□□□ -1.81
MRE11P49959 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.73□□□□□ -1.81
MRE11P49959 AC091179.1-201ENST00000461606 579 ntBASIC3.73□□□□□ -1.81
MRE11P49959 AC133134.1-201ENST00000466800 359 ntBASIC3.73□□□□□ -1.81
MRE11P49959 AC093852.1-201ENST00000503587 266 ntBASIC3.73□□□□□ -1.81
MRE11P49959 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.73□□□□□ -1.81
MRE11P49959 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.73□□□□□ -1.81
MRE11P49959 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.73□□□□□ -1.81
MRE11P49959 AC073657.2-201ENST00000605661 303 ntBASIC3.73□□□□□ -1.81
MRE11P49959 AP002826.1-201ENST00000608835 315 ntBASIC3.73□□□□□ -1.81
MRE11P49959 AC062037.2-201ENST00000610137 73 ntBASIC3.73□□□□□ -1.81
MRE11P49959 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.73□□□□□ -1.81
MRE11P49959 MIR8062-201ENST00000621515 85 ntBASIC3.73□□□□□ -1.81
MRE11P49959 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.73□□□□□ -1.81
MRE11P49959 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.73□□□□□ -1.81
MRE11P49959 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
MRE11P49959 RNU6-379P-201ENST00000363813 104 ntBASIC3.72□□□□□ -1.81
MRE11P49959 Y_RNA.307-201ENST00000365022 117 ntBASIC3.72□□□□□ -1.81
MRE11P49959 Y_RNA.396-201ENST00000383949 103 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AL117339.3-201ENST00000418733 162 ntBASIC3.72□□□□□ -1.81
MRE11P49959 DBIP2-201ENST00000419076 262 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AL627311.1-201ENST00000431514 115 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AL353705.1-201ENST00000433468 480 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.72□□□□□ -1.81
MRE11P49959 AC107083.1-201ENST00000439643 279 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AC073910.1-201ENST00000445047 438 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.72□□□□□ -1.81
MRE11P49959 RBMY2UP-201ENST00000453474 324 ntBASIC3.72□□□□□ -1.81
MRE11P49959 RPL23AP45-201ENST00000476406 468 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.72□□□□□ -1.81
MRE11P49959 SNORA70.16-201ENST00000516390 95 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AC025755.1-201ENST00000521306 278 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.72□□□□□ -1.81
MRE11P49959 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.72□□□□□ -1.81
MRE11P49959 AC006600.1-201ENST00000572529 153 ntBASIC3.72□□□□□ -1.81
MRE11P49959 AC068831.7-201ENST00000616954 363 ntBASIC3.72□□□□□ -1.81
MRE11P49959 IGHVIII-44-202ENST00000636235 289 ntBASIC3.72□□□□□ -1.81
MRE11P49959 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
MRE11P49959 RNU6-874P-201ENST00000362390 105 ntBASIC3.71□□□□□ -1.82
MRE11P49959 SNORD9-201ENST00000362566 104 ntBASIC3.71□□□□□ -1.82
MRE11P49959 RNU6-741P-201ENST00000383889 107 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR521-1-201ENST00000384902 87 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR10A-201ENST00000385043 110 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR625-201ENST00000385047 85 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MIR504-201ENST00000385065 83 ntBASIC3.71□□□□□ -1.82
MRE11P49959 SNORA40C-201ENST00000391285 128 ntBASIC3.71□□□□□ -1.82
MRE11P49959 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.71□□□□□ -1.82
MRE11P49959 AC006028.1-201ENST00000438379 402 ntBASIC3.71□□□□□ -1.82
MRE11P49959 U3.44-201ENST00000458938 192 ntBASIC3.71□□□□□ -1.82
MRE11P49959 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.71□□□□□ -1.82
MRE11P49959 TRBV12-1-201ENST00000479785 344 ntBASIC3.71□□□□□ -1.82
MRE11P49959 AP004217.1-201ENST00000480579 346 ntBASIC3.71□□□□□ -1.82
MRE11P49959 AC104564.1-201ENST00000493028 407 ntBASIC3.71□□□□□ -1.82
MRE11P49959 AC139453.3-201ENST00000493276 369 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms