Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 Y_RNA.682-201ENST00000516457 100 ntBASIC2.56□□□□□ -2
CLK1P49759 RNU6-566P-201ENST00000516790 107 ntBASIC2.56□□□□□ -2
CLK1P49759 RNU6-273P-201ENST00000516937 96 ntBASIC2.56□□□□□ -2
CLK1P49759 SNORA25.17-201ENST00000517184 124 ntBASIC2.56□□□□□ -2
CLK1P49759 COPS8P3-201ENST00000526024 482 ntBASIC2.56□□□□□ -2
CLK1P49759 AP005597.4-201ENST00000526762 229 ntBASIC2.56□□□□□ -2
CLK1P49759 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.56□□□□□ -2
CLK1P49759 MIR4529-201ENST00000578110 78 ntBASIC2.56□□□□□ -2
CLK1P49759 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
CLK1P49759 AL133255.1-201ENST00000606374 441 ntBASIC2.56□□□□□ -2
CLK1P49759 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.56□□□□□ -2
CLK1P49759 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLK1P49759 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
CLK1P49759 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.56□□□□□ -2
CLK1P49759 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLK1P49759 AC138393.1-203ENST00000327086 343 ntBASIC2.55□□□□□ -2
CLK1P49759 SNORA4.3-201ENST00000365564 137 ntBASIC2.55□□□□□ -2
CLK1P49759 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CLK1P49759 Y_RNA.387-201ENST00000383918 102 ntBASIC2.55□□□□□ -2
CLK1P49759 SNORA75B-201ENST00000384053 137 ntBASIC2.55□□□□□ -2
CLK1P49759 RNU6-1013P-201ENST00000384180 107 ntBASIC2.55□□□□□ -2
CLK1P49759 RNU6-45P-201ENST00000384471 107 ntBASIC2.55□□□□□ -2
CLK1P49759 SNORD116-29-201ENST00000384516 83 ntBASIC2.55□□□□□ -2
CLK1P49759 MIR301A-201ENST00000385261 86 ntBASIC2.55□□□□□ -2
CLK1P49759 SNORA11.1-201ENST00000408133 129 ntBASIC2.55□□□□□ -2
CLK1P49759 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.55□□□□□ -2
CLK1P49759 AL353621.1-201ENST00000418219 243 ntBASIC2.55□□□□□ -2
CLK1P49759 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.55□□□□□ -2
CLK1P49759 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.55□□□□□ -2
CLK1P49759 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.55□□□□□ -2
CLK1P49759 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
CLK1P49759 AC009238.1-201ENST00000442165 424 ntBASIC2.55□□□□□ -2
CLK1P49759 RPL32P28-201ENST00000443577 397 ntBASIC2.55□□□□□ -2
CLK1P49759 AC009237.6-201ENST00000446969 424 ntBASIC2.55□□□□□ -2
CLK1P49759 AC139453.3-201ENST00000493276 369 ntBASIC2.55□□□□□ -2
CLK1P49759 MTND5P5-201ENST00000503764 376 ntBASIC2.55□□□□□ -2
CLK1P49759 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.55□□□□□ -2
CLK1P49759 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.55□□□□□ -2
CLK1P49759 SMURF2P1-201ENST00000514992 481 ntBASIC2.55□□□□□ -2
CLK1P49759 RNU6-581P-201ENST00000516214 105 ntBASIC2.55□□□□□ -2
CLK1P49759 RNA5SP454-201ENST00000517231 127 ntBASIC2.55□□□□□ -2
CLK1P49759 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.55□□□□□ -2
CLK1P49759 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.55□□□□□ -2
CLK1P49759 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.55□□□□□ -2
CLK1P49759 AP005639.2-201ENST00000527592 928 ntBASIC2.55□□□□□ -2
CLK1P49759 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.55□□□□□ -2
CLK1P49759 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.55□□□□□ -2
CLK1P49759 FRG2DP-202ENST00000566967 323 ntBASIC2.55□□□□□ -2
CLK1P49759 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.55□□□□□ -2
CLK1P49759 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.55□□□□□ -2
CLK1P49759 AC005046.1-201ENST00000608515 625 ntBASIC2.55□□□□□ -2
CLK1P49759 U2.17-201ENST00000611454 95 ntBASIC2.55□□□□□ -2
CLK1P49759 AL138726.1-201ENST00000614873 333 ntBASIC2.55□□□□□ -2
CLK1P49759 MIR6134-201ENST00000617606 109 ntBASIC2.55□□□□□ -2
CLK1P49759 AL359757.2-201ENST00000624309 274 ntBASIC2.55□□□□□ -2
CLK1P49759 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
CLK1P49759 CDC27P3-201ENST00000635418 1910 ntBASIC2.54□□□□□ -2
CLK1P49759 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CLK1P49759 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.54□□□□□ -2
CLK1P49759 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CLK1P49759 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CLK1P49759 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
CLK1P49759 Y_RNA.138-201ENST00000363462 102 ntBASIC2.54□□□□□ -2
CLK1P49759 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.54□□□□□ -2
CLK1P49759 RNU6-1227P-201ENST00000383981 107 ntBASIC2.54□□□□□ -2
CLK1P49759 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.54□□□□□ -2
CLK1P49759 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.54□□□□□ -2
CLK1P49759 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.54□□□□□ -2
CLK1P49759 RPL23AP83-201ENST00000434984 473 ntBASIC2.54□□□□□ -2
CLK1P49759 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.54□□□□□ -2
CLK1P49759 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.54□□□□□ -2
CLK1P49759 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.54□□□□□ -2
CLK1P49759 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.54□□□□□ -2
CLK1P49759 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.54□□□□□ -2
CLK1P49759 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.54□□□□□ -2
CLK1P49759 AC027176.1-201ENST00000560204 514 ntBASIC2.54□□□□□ -2
CLK1P49759 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
CLK1P49759 APOOP1-201ENST00000604695 592 ntBASIC2.54□□□□□ -2
CLK1P49759 ATP5A1P2-202ENST00000616464 443 ntBASIC2.54□□□□□ -2
CLK1P49759 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.54□□□□□ -2
CLK1P49759 Z99571.1-201ENST00000636677 394 ntBASIC2.54□□□□□ -2
CLK1P49759 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLK1P49759 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
CLK1P49759 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.53□□□□□ -2
CLK1P49759 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.53□□□□□ -2
CLK1P49759 OR56A5-201ENST00000340110 738 ntBASIC2.53□□□□□ -2
CLK1P49759 SNORD116-11-201ENST00000383882 92 ntBASIC2.53□□□□□ -2
CLK1P49759 Y_RNA.384-201ENST00000383909 102 ntBASIC2.53□□□□□ -2
CLK1P49759 MIR450B-201ENST00000401182 78 ntBASIC2.53□□□□□ -2
CLK1P49759 AIMP1P2-201ENST00000425294 312 ntBASIC2.53□□□□□ -2
CLK1P49759 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.53□□□□□ -2
CLK1P49759 BTF3P15-201ENST00000455606 336 ntBASIC2.53□□□□□ -2
CLK1P49759 Y_RNA.635-201ENST00000459041 101 ntBASIC2.53□□□□□ -2
CLK1P49759 AC022493.1-201ENST00000492984 337 ntBASIC2.53□□□□□ -2
CLK1P49759 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.53□□□□□ -2
CLK1P49759 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.53□□□□□ -2
CLK1P49759 SCARNA15.1-201ENST00000516384 125 ntBASIC2.53□□□□□ -2
CLK1P49759 ACA59.2-201ENST00000517061 156 ntBASIC2.53□□□□□ -2
CLK1P49759 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.53□□□□□ -2
CLK1P49759 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms