Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC012308.1-201ENST00000451232 178 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 FGF7P6-202ENST00000451282 293 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 RNU6-1208P-201ENST00000459588 107 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 MED28P2-201ENST00000475771 317 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.31□□□□□ -2.04
NEDD4P46934 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD4P46934 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.31□□□□□ -2.04
NEDD4P46934 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.31□□□□□ -2.04
NEDD4P46934 RNU6-718P-201ENST00000516166 105 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 AC026241.1-201ENST00000517873 2142 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.31□□□□□ -2.04
NEDD4P46934 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.31□□□□□ -2.04
NEDD4P46934 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.31□□□□□ -2.04
NEDD4P46934 AC010525.2-201ENST00000590920 195 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 VN1R80P-201ENST00000597126 338 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 AC096772.1-201ENST00000609146 564 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.31□□□□□ -2.04
NEDD4P46934 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD4P46934 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD4P46934 AL109809.4-201ENST00000603520 2185 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 ZNF355P-201ENST00000427301 3216 ntBASIC2.31□□□□□ -2.04
NEDD4P46934 MAPK10-266ENST00000641066 6555 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
NEDD4P46934 RNU6-534P-201ENST00000364877 106 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 Y_RNA.295-201ENST00000364918 102 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 RNU6-487P-201ENST00000365430 104 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 Y_RNA.378-201ENST00000365652 113 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.3□□□□□ -2.04
NEDD4P46934 HMGB1P31-201ENST00000437242 427 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 AC003989.2-201ENST00000440224 169 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 AC009296.1-201ENST00000443146 155 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.3□□□□□ -2.04
NEDD4P46934 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.3□□□□□ -2.04
NEDD4P46934 RPL22P13-201ENST00000493291 347 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 MTCYBP40-201ENST00000509390 1135 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NEDD4P46934 MTND4LP26-201ENST00000518144 282 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.3□□□□□ -2.04
NEDD4P46934 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD4P46934 AC092747.3-201ENST00000603769 301 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 AC104458.1-201ENST00000608243 463 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.3□□□□□ -2.04
NEDD4P46934 AC092807.2-201ENST00000609367 243 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 AC002553.4-201ENST00000616896 331 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 MIR7843-201ENST00000622274 79 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 AC024614.3-201ENST00000637860 256 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 U4.7-201ENST00000638126 106 ntBASIC2.3□□□□□ -2.04
NEDD4P46934 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NEDD4P46934 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NEDD4P46934 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-37P-201ENST00000362692 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-11P-201ENST00000364234 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-25P-201ENST00000383873 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-1-201ENST00000383898 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-48P-201ENST00000384161 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-36P-201ENST00000384172 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-4P-201ENST00000384205 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-5P-201ENST00000384238 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-3P-201ENST00000384314 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-16P-201ENST00000384385 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-15P-201ENST00000384534 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-2-201ENST00000384627 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-29P-201ENST00000384637 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-9-201ENST00000384776 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-33P-201ENST00000384793 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NEDD4P46934 EIF4E2P1-201ENST00000393781 255 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU2-20P-201ENST00000410425 191 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 SNORD56-201ENST00000413522 71 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 AC074117.2-201ENST00000417130 397 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD4P46934 RPS15AP7-201ENST00000439294 405 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD4P46934 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD4P46934 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.29□□□□□ -2.04
NEDD4P46934 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD4P46934 SNORA31.6-201ENST00000516241 130 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-1038P-201ENST00000516516 104 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 SNORA31.18-201ENST00000517043 134 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 COPS8P3-201ENST00000526024 482 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 COX6CP5-201ENST00000527162 228 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD4P46934 AL118558.2-201ENST00000556294 238 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 MIR3616-201ENST00000584070 92 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 MIR4765-201ENST00000585007 77 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 APOOP1-201ENST00000604695 592 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 RNU6-6P-201ENST00000606623 107 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 AL359854.1-201ENST00000614203 1594 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 AC007014.2-201ENST00000615581 479 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD4P46934 AC244517.12-201ENST00000623581 663 ntBASIC2.29□□□□□ -2.04
NEDD4P46934 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEDD4P46934 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NEDD4P46934 RNU6-78P-201ENST00000362897 107 ntBASIC2.28□□□□□ -2.04
NEDD4P46934 Y_RNA.256-201ENST00000364594 104 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms