Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR3670-2-201ENST00000582974 65 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 MIR3670-1-201ENST00000584160 65 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 MIR3670-3-201ENST00000584855 65 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX2-1P43699 AC073410.2-201ENST00000603240 332 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 AP001836.1-201ENST00000604675 523 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 MIR3670-4-201ENST00000612260 65 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 AL159153.1-201ENST00000619688 317 ntBASIC2.31□□□□□ -2.04
NKX2-1P43699 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX2-1P43699 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX2-1P43699 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.31□□□□□ -2.04
NKX2-1P43699 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NKX2-1P43699 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.3□□□□□ -2.04
NKX2-1P43699 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX2-1P43699 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX2-1P43699 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX2-1P43699 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NKX2-1P43699 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
NKX2-1P43699 SNORA63.1-201ENST00000362493 131 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 RNU6-428P-201ENST00000362942 107 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 RNU6-784P-201ENST00000384330 106 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 RNVU1-14-201ENST00000384770 164 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 MTCYBP4-201ENST00000401524 249 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AL591034.2-201ENST00000402839 359 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AL078595.1-201ENST00000404458 226 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 EIF4EP2-201ENST00000422816 654 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AC078809.1-201ENST00000427601 140 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX2-1P43699 AP000705.1-201ENST00000454567 350 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 PCMTD1P1-201ENST00000455560 355 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 RNU7-187P-201ENST00000458985 68 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.3□□□□□ -2.04
NKX2-1P43699 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.3□□□□□ -2.04
NKX2-1P43699 AK3P2-201ENST00000507976 429 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AC026782.1-201ENST00000512952 449 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX2-1P43699 AC091826.1-201ENST00000514065 313 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX2-1P43699 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX2-1P43699 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX2-1P43699 AC103996.1-201ENST00000555468 102 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 MIR5571-201ENST00000577998 113 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 MIR5004-201ENST00000579078 107 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.3□□□□□ -2.04
NKX2-1P43699 AC018462.2-201ENST00000605375 395 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AC016727.1-205ENST00000605437 569 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 MIR92B-201ENST00000607575 96 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AC069200.1-201ENST00000609511 323 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 MIR7112-201ENST00000616126 65 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX2-1P43699 AC112487.2-201ENST00000637950 304 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AC092593.1-201ENST00000515413 1815 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 AP000560.1-201ENST00000624150 1937 ntBASIC2.3□□□□□ -2.04
NKX2-1P43699 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX2-1P43699 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
NKX2-1P43699 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NKX2-1P43699 RNU6-227P-201ENST00000362865 103 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 RNU6-1285P-201ENST00000363480 105 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 SNORA38.1-201ENST00000364172 131 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 RNU6-1141P-201ENST00000364520 107 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 SNORD32A-201ENST00000364805 84 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 Y_RNA.384-201ENST00000383909 102 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 MIR186-201ENST00000384988 86 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 MIR218-1-201ENST00000384999 110 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 RNA5SP171-201ENST00000391071 115 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 AL133475.1-201ENST00000404414 305 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 RN7SKP61-201ENST00000410642 295 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 RNU6-325P-201ENST00000411132 105 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AC003685.2-201ENST00000422795 395 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX2-1P43699 MTND3P23-201ENST00000431980 347 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 AL133396.1-201ENST00000432048 687 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AC104389.3-201ENST00000445629 235 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NKX2-1P43699 AL031274.1-201ENST00000450334 232 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AC003982.1-202ENST00000469928 248 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 RPL7P49-201ENST00000471402 708 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 AC090525.1-201ENST00000479116 478 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 SMURF2P1-201ENST00000514992 481 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 RNU6-612P-201ENST00000516909 102 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 RNU1-54P-201ENST00000517181 120 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AP005902.1-201ENST00000521358 186 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 AC115990.1-201ENST00000526957 301 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-1P43699 AL355375.2-201ENST00000574825 175 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 MIR5696-201ENST00000578474 85 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 MIR3944-201ENST00000581277 108 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 MIR5690-201ENST00000583739 73 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 AC019193.3-201ENST00000609144 554 ntBASIC2.29□□□□□ -2.04
NKX2-1P43699 MIR5739-201ENST00000619803 80 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms