Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Y_RNA.676-201ENST00000516393 96 ntBASIC1.42□□□□□ -2.18
RFC3P40938 RNU2-46P-201ENST00000517038 113 ntBASIC1.42□□□□□ -2.18
RFC3P40938 COPS8P3-201ENST00000526024 482 ntBASIC1.42□□□□□ -2.18
RFC3P40938 AL356057.1-201ENST00000533798 831 ntBASIC1.42□□□□□ -2.18
RFC3P40938 MIR4255-201ENST00000579351 72 ntBASIC1.42□□□□□ -2.18
RFC3P40938 AC103987.3-201ENST00000582071 292 ntBASIC1.42□□□□□ -2.18
RFC3P40938 AL022161.1-201ENST00000604390 213 ntBASIC1.42□□□□□ -2.18
RFC3P40938 AC018889.1-201ENST00000605372 397 ntBASIC1.42□□□□□ -2.18
RFC3P40938 AP000654.2-201ENST00000605633 586 ntBASIC1.42□□□□□ -2.18
RFC3P40938 AL512598.1-201ENST00000610158 273 ntBASIC1.42□□□□□ -2.18
RFC3P40938 AC068787.1-201ENST00000623908 691 ntBASIC1.42□□□□□ -2.18
RFC3P40938 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
RFC3P40938 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RFC3P40938 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RFC3P40938 RNU6-1285P-201ENST00000363480 105 ntBASIC1.41□□□□□ -2.18
RFC3P40938 SNORD115-7-201ENST00000365306 82 ntBASIC1.41□□□□□ -2.18
RFC3P40938 MIR30A-201ENST00000385092 71 ntBASIC1.41□□□□□ -2.18
RFC3P40938 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RFC3P40938 RNA5SP100-201ENST00000410903 110 ntBASIC1.41□□□□□ -2.18
RFC3P40938 RNA5SP59-201ENST00000410922 110 ntBASIC1.41□□□□□ -2.18
RFC3P40938 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.41□□□□□ -2.18
RFC3P40938 OR6C66P-201ENST00000414917 930 ntBASIC1.41□□□□□ -2.18
RFC3P40938 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RFC3P40938 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.41□□□□□ -2.18
RFC3P40938 Z82205.1-201ENST00000428456 297 ntBASIC1.41□□□□□ -2.18
RFC3P40938 AC021146.2-201ENST00000504736 556 ntBASIC1.41□□□□□ -2.18
RFC3P40938 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.41□□□□□ -2.18
RFC3P40938 AC074344.1-201ENST00000512823 224 ntBASIC1.41□□□□□ -2.18
RFC3P40938 AC104136.1-201ENST00000512969 394 ntBASIC1.41□□□□□ -2.18
RFC3P40938 SNORA3.4-201ENST00000515969 96 ntBASIC1.41□□□□□ -2.18
RFC3P40938 RNVU1-2-201ENST00000516326 135 ntBASIC1.41□□□□□ -2.18
RFC3P40938 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
RFC3P40938 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.41□□□□□ -2.18
RFC3P40938 AC087441.2-201ENST00000529141 262 ntBASIC1.41□□□□□ -2.18
RFC3P40938 MIR3169-201ENST00000578032 83 ntBASIC1.41□□□□□ -2.18
RFC3P40938 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.41□□□□□ -2.18
RFC3P40938 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.41□□□□□ -2.18
RFC3P40938 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.41□□□□□ -2.18
RFC3P40938 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
RFC3P40938 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.41□□□□□ -2.18
RFC3P40938 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RFC3P40938 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RFC3P40938 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.41□□□□□ -2.18
RFC3P40938 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.41□□□□□ -2.18
RFC3P40938 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
RFC3P40938 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RFC3P40938 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RFC3P40938 RNU6-23P-201ENST00000363283 107 ntBASIC1.4□□□□□ -2.19
RFC3P40938 RNA5SP493-201ENST00000364115 91 ntBASIC1.4□□□□□ -2.19
RFC3P40938 SNORD32B-201ENST00000364460 84 ntBASIC1.4□□□□□ -2.19
RFC3P40938 RNU6-45P-201ENST00000384471 107 ntBASIC1.4□□□□□ -2.19
RFC3P40938 AL357139.1-201ENST00000407792 426 ntBASIC1.4□□□□□ -2.19
RFC3P40938 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.4□□□□□ -2.19
RFC3P40938 Z99497.1-201ENST00000421282 135 ntBASIC1.4□□□□□ -2.19
RFC3P40938 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.4□□□□□ -2.19
RFC3P40938 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.4□□□□□ -2.19
RFC3P40938 AC104850.1-201ENST00000435940 476 ntBASIC1.4□□□□□ -2.19
RFC3P40938 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.4□□□□□ -2.19
RFC3P40938 KATNBL1P3-201ENST00000443475 909 ntBASIC1.4□□□□□ -2.19
RFC3P40938 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.4□□□□□ -2.19
RFC3P40938 AC022447.4-201ENST00000504053 364 ntBASIC1.4□□□□□ -2.19
RFC3P40938 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.4□□□□□ -2.19
RFC3P40938 AC090572.1-201ENST00000519251 160 ntBASIC1.4□□□□□ -2.19
RFC3P40938 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.4□□□□□ -2.19
RFC3P40938 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.4□□□□□ -2.19
RFC3P40938 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.4□□□□□ -2.19
RFC3P40938 AC068944.2-201ENST00000610373 403 ntBASIC1.4□□□□□ -2.19
RFC3P40938 AL133173.2-201ENST00000614270 90 ntBASIC1.4□□□□□ -2.19
RFC3P40938 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.4□□□□□ -2.19
RFC3P40938 MTND4P4-201ENST00000439033 1366 ntBASIC1.39□□□□□ -2.19
RFC3P40938 RNU6-105P-201ENST00000363909 104 ntBASIC1.39□□□□□ -2.19
RFC3P40938 RNU6-116P-201ENST00000384042 109 ntBASIC1.39□□□□□ -2.19
RFC3P40938 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
RFC3P40938 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.39□□□□□ -2.19
RFC3P40938 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RFC3P40938 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.39□□□□□ -2.19
RFC3P40938 AC073614.1-201ENST00000438690 650 ntBASIC1.39□□□□□ -2.19
RFC3P40938 AL357134.1-201ENST00000445848 426 ntBASIC1.39□□□□□ -2.19
RFC3P40938 AC112492.4-201ENST00000456549 352 ntBASIC1.39□□□□□ -2.19
RFC3P40938 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.39□□□□□ -2.19
RFC3P40938 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.39□□□□□ -2.19
RFC3P40938 AL163540.1-201ENST00000485382 386 ntBASIC1.39□□□□□ -2.19
RFC3P40938 AC132942.1-201ENST00000486753 483 ntBASIC1.39□□□□□ -2.19
RFC3P40938 AC005178.1-201ENST00000508392 440 ntBASIC1.39□□□□□ -2.19
RFC3P40938 FAM206BP-201ENST00000510179 541 ntBASIC1.39□□□□□ -2.19
RFC3P40938 Vault.3-201ENST00000516676 95 ntBASIC1.39□□□□□ -2.19
RFC3P40938 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.39□□□□□ -2.19
RFC3P40938 TRAV32-201ENST00000553993 340 ntBASIC1.39□□□□□ -2.19
RFC3P40938 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.39□□□□□ -2.19
RFC3P40938 MIR4781-201ENST00000585250 76 ntBASIC1.39□□□□□ -2.19
RFC3P40938 AC011458.1-201ENST00000604034 617 ntBASIC1.39□□□□□ -2.19
RFC3P40938 AC016925.2-201ENST00000605108 242 ntBASIC1.39□□□□□ -2.19
RFC3P40938 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.39□□□□□ -2.19
RFC3P40938 AC130454.1-201ENST00000622948 401 ntBASIC1.39□□□□□ -2.19
RFC3P40938 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
RFC3P40938 RNU4-15P-201ENST00000362613 141 ntBASIC1.38□□□□□ -2.19
RFC3P40938 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.38□□□□□ -2.19
RFC3P40938 RNU6-338P-201ENST00000383888 105 ntBASIC1.38□□□□□ -2.19
RFC3P40938 RNU6-1245P-201ENST00000411130 106 ntBASIC1.38□□□□□ -2.19
RFC3P40938 AC011233.1-201ENST00000422812 283 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms