Protein–RNA interactions for Protein: P38935

IGHMBP2, DNA-binding protein SMUBP-2, humanhuman

Known RBP Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHMBP2P38935 AC026782.1-201ENST00000512952 449 ntBASIC3.1□□□□□ -1.91
IGHMBP2P38935 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.1□□□□□ -1.91
IGHMBP2P38935 RNU6-1153P-201ENST00000516760 105 ntBASIC3.1□□□□□ -1.91
IGHMBP2P38935 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.1□□□□□ -1.91
IGHMBP2P38935 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.1□□□□□ -1.91
IGHMBP2P38935 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.1□□□□□ -1.91
IGHMBP2P38935 AC011890.2-201ENST00000613393 294 ntBASIC3.1□□□□□ -1.91
IGHMBP2P38935 AC098657.3-201ENST00000620434 263 ntBASIC3.1□□□□□ -1.91
IGHMBP2P38935 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.1□□□□□ -1.91
IGHMBP2P38935 U4.7-201ENST00000638126 106 ntBASIC3.1□□□□□ -1.91
IGHMBP2P38935 CDC27P3-201ENST00000635418 1910 ntBASIC3.1□□□□□ -1.91
IGHMBP2P38935 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
IGHMBP2P38935 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
IGHMBP2P38935 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
IGHMBP2P38935 KPNA2P1-201ENST00000458289 1591 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
IGHMBP2P38935 RNU6-428P-201ENST00000362942 107 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 RNU6-942P-201ENST00000363002 107 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 MIR517A-201ENST00000385001 87 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 RNA5SP210-201ENST00000391034 120 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 MTCYBP4-201ENST00000401524 249 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 RNU6-325P-201ENST00000411132 105 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.09□□□□□ -1.91
IGHMBP2P38935 RNU6-377P-201ENST00000515965 102 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 AC103996.1-201ENST00000555468 102 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 AC021739.1-201ENST00000559631 174 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 AC020895.1-201ENST00000595362 272 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 AC009314.1-201ENST00000603871 304 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 AC018462.2-201ENST00000605375 395 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 AC124303.1-201ENST00000605703 360 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 AC019193.3-201ENST00000609144 554 ntBASIC3.09□□□□□ -1.91
IGHMBP2P38935 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.09□□□□□ -1.91
IGHMBP2P38935 ADAM3A-203ENST00000461344 2157 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
IGHMBP2P38935 SNORA70B-201ENST00000384210 135 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 Y_RNA.473-201ENST00000384333 102 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AL590004.2-201ENST00000404787 371 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 Y_RNA.594-201ENST00000410373 140 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AC023141.4-201ENST00000412031 328 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.08□□□□□ -1.92
IGHMBP2P38935 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.08□□□□□ -1.92
IGHMBP2P38935 USP9YP30-201ENST00000430729 455 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 RPS15AP10-201ENST00000432472 382 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AC104389.3-201ENST00000445629 235 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AC007677.1-201ENST00000445757 515 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 PCMTD1P1-201ENST00000455560 355 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 SNORD5.1-201ENST00000458800 75 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AK3P2-201ENST00000507976 429 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 MTND4LP22-201ENST00000508209 276 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 RNU6-581P-201ENST00000516214 105 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 Y_RNA.670-201ENST00000516255 105 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 SNORA43.2-201ENST00000516652 128 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 RNU6-1213P-201ENST00000517075 94 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 CKS1BP7-201ENST00000522230 235 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 MIR5690-201ENST00000583739 73 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AP000654.2-201ENST00000605633 586 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AL133215.3-201ENST00000609801 448 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 AL669831.3-213ENST00000636676 183 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
IGHMBP2P38935 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
IGHMBP2P38935 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
IGHMBP2P38935 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
IGHMBP2P38935 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
IGHMBP2P38935 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
IGHMBP2P38935 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
IGHMBP2P38935 RNU6-1317P-201ENST00000364582 104 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 Y_RNA.315-201ENST00000365117 102 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 RNU6-1280P-201ENST00000365211 107 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 RNU6-43P-201ENST00000384302 107 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 RNU6-1011P-201ENST00000384668 107 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 Y_RNA.579-201ENST00000390939 94 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 SNORA75.4-201ENST00000391278 119 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 AL359511.1-201ENST00000402970 211 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 RNU6-1050P-201ENST00000410388 107 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 RPS15AP5-201ENST00000436276 388 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 RNU7-152P-201ENST00000458982 64 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 Y_RNA.653-201ENST00000459091 95 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.07□□□□□ -1.92
IGHMBP2P38935 MTCYBP40-201ENST00000509390 1135 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 PTP4A1P4-201ENST00000512479 322 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.07□□□□□ -1.92
IGHMBP2P38935 Y_RNA.708-201ENST00000516950 96 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.07□□□□□ -1.92
IGHMBP2P38935 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.07□□□□□ -1.92
IGHMBP2P38935 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.07□□□□□ -1.92
IGHMBP2P38935 AC006199.1-201ENST00000548728 219 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 CPDP1-201ENST00000579660 283 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 AL353621.2-201ENST00000605340 133 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 AC009229.3-201ENST00000608056 282 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 AC107871.2-201ENST00000612894 502 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 MIR6733-201ENST00000635723 61 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
IGHMBP2P38935 MTND4P23-201ENST00000447723 1363 ntBASIC3.07□□□□□ -1.92
IGHMBP2P38935 RNU6-1059P-201ENST00000363752 98 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms