Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MTND5P6-201ENST00000422338 1798 ntBASIC2.53□□□□□ -2
HOXD13P35453 AC121333.1-201ENST00000567488 2709 ntBASIC2.53□□□□□ -2
HOXD13P35453 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.52□□□□□ -2.01
HOXD13P35453 RNU4-82P-201ENST00000362443 140 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 SNORA25B-201ENST00000365507 128 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 RNU4-20P-201ENST00000365601 151 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 Y_RNA.402-201ENST00000383972 102 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 RNU1-148P-201ENST00000384472 162 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 Y_RNA.573-201ENST00000384763 105 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 MIR514A2-201ENST00000385131 88 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 MIR514A3-201ENST00000385132 88 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 RNU4-26P-201ENST00000410270 107 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 RNU6-1068P-201ENST00000410958 103 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 USP9YP18-201ENST00000425912 695 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 AL589823.1-201ENST00000429577 183 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 RPL32P28-201ENST00000443577 397 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 AC068781.1-201ENST00000488231 618 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 RNU6-1069P-201ENST00000516612 133 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXD13P35453 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXD13P35453 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.52□□□□□ -2.01
HOXD13P35453 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXD13P35453 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.52□□□□□ -2.01
HOXD13P35453 AC009314.1-201ENST00000603871 304 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
HOXD13P35453 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.52□□□□□ -2.01
HOXD13P35453 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
HOXD13P35453 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXD13P35453 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HOXD13P35453 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXD13P35453 snoU2_19.1-201ENST00000362361 80 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 RNU6-214P-201ENST00000384130 107 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 RNU6-692P-201ENST00000384496 107 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 RNU6-780P-201ENST00000391030 104 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 RNA5SP270-201ENST00000411361 118 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXD13P35453 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXD13P35453 MTCO1P20-201ENST00000425366 358 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 AC078809.1-201ENST00000427601 140 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 AC091435.1-201ENST00000505442 584 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 AL118558.2-201ENST00000556294 238 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 ELOCP5-201ENST00000604924 333 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 SNORD14A-201ENST00000606526 91 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 AL161423.1-201ENST00000613700 262 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 AC245884.12-201ENST00000615364 59 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 U4.5-201ENST00000617137 123 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 MIR203B-201ENST00000636080 86 ntBASIC2.51□□□□□ -2.01
HOXD13P35453 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HOXD13P35453 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXD13P35453 Y_RNA.3-201ENST00000362331 103 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 RNU6-1285P-201ENST00000363480 105 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 RNU6-546P-201ENST00000383991 107 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 RNU6-43P-201ENST00000384302 107 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 RNU6-1274P-201ENST00000384557 107 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 RNU6-908P-201ENST00000410160 94 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 HMGB3P2-201ENST00000411913 584 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 AC244670.1-201ENST00000436879 112 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 AL353752.1-201ENST00000454946 260 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 UBE2DNL-203ENST00000474922 222 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXD13P35453 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXD13P35453 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXD13P35453 RNA5SP281-201ENST00000516504 135 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXD13P35453 AP000889.2-201ENST00000532684 490 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 AC016957.1-201ENST00000534895 309 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 HSPE1P4-201ENST00000550617 308 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 AC026271.5-201ENST00000577873 130 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 RNU6-89P-201ENST00000606519 100 ntBASIC2.5□□□□□ -2.01
HOXD13P35453 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
HOXD13P35453 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.5□□□□□ -2.01
HOXD13P35453 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXD13P35453 RNU1-23P-201ENST00000363361 144 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 RNU6-1215P-201ENST00000384441 102 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HOXD13P35453 AL445529.1-201ENST00000398713 389 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 AL591034.2-201ENST00000402839 359 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 RN7SKP61-201ENST00000410642 295 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 RNU2-32P-201ENST00000411193 191 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 SNAP23P1-201ENST00000433229 246 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 AL359672.1-201ENST00000442302 409 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXD13P35453 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXD13P35453 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXD13P35453 HMGB1P35-201ENST00000503360 598 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 AC016632.1-201ENST00000503994 196 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 RNU5F-2P-201ENST00000516066 82 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXD13P35453 AC034114.1-201ENST00000520293 285 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 AK6P1-201ENST00000540219 478 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 AP000763.2-201ENST00000540641 163 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 AC007375.1-201ENST00000554513 578 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXD13P35453 MIR5692C1-201ENST00000585309 91 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 AP001836.1-201ENST00000604675 523 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms