Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC4P35249 AL353770.2-201ENST00000620024 78 ntBASIC1.93□□□□□ -2.1
RFC4P35249 RNU6-282P-201ENST00000365357 103 ntBASIC1.92□□□□□ -2.1
RFC4P35249 RNU6-1032P-201ENST00000384100 107 ntBASIC1.92□□□□□ -2.1
RFC4P35249 RNU6-248P-201ENST00000410720 107 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.92□□□□□ -2.1
RFC4P35249 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.92□□□□□ -2.1
RFC4P35249 MTND3P17-201ENST00000416968 344 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AC138623.1-201ENST00000418060 216 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.92□□□□□ -2.1
RFC4P35249 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.92□□□□□ -2.1
RFC4P35249 MTCO3P5-201ENST00000433620 714 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AL031667.1-201ENST00000440222 725 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.92□□□□□ -2.1
RFC4P35249 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.92□□□□□ -2.1
RFC4P35249 MTND3P25-201ENST00000509243 135 ntBASIC1.92□□□□□ -2.1
RFC4P35249 ATP5EP1-201ENST00000510257 156 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.92□□□□□ -2.1
RFC4P35249 AP005639.2-201ENST00000527592 928 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AC233702.2-202ENST00000562547 291 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.92□□□□□ -2.1
RFC4P35249 BNIP3P30-201ENST00000601184 574 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AC093788.1-201ENST00000609356 927 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AC011155.2-201ENST00000623202 216 ntBASIC1.92□□□□□ -2.1
RFC4P35249 AC091895.1-201ENST00000624494 256 ntBASIC1.92□□□□□ -2.1
RFC4P35249 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RFC4P35249 RNU6-74P-201ENST00000384235 107 ntBASIC1.91□□□□□ -2.1
RFC4P35249 RPL21P1-201ENST00000399532 476 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 UBE2V1P10-201ENST00000414685 269 ntBASIC1.91□□□□□ -2.1
RFC4P35249 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 MTCYBP5-201ENST00000423752 1135 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 GPR143P-201ENST00000434155 205 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AC244505.5-201ENST00000443639 207 ntBASIC1.91□□□□□ -2.1
RFC4P35249 NDUFB1P2-201ENST00000449477 176 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AC012308.1-201ENST00000451232 178 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 AL162395.1-201ENST00000457882 422 ntBASIC1.91□□□□□ -2.1
RFC4P35249 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 RNU6-410P-201ENST00000517006 107 ntBASIC1.91□□□□□ -2.1
RFC4P35249 RNU6-685P-201ENST00000517088 95 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AC007834.2-201ENST00000536310 343 ntBASIC1.91□□□□□ -2.1
RFC4P35249 OSBPL9P5-201ENST00000542581 171 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.91□□□□□ -2.1
RFC4P35249 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC4P35249 AC073539.2-201ENST00000597113 165 ntBASIC1.91□□□□□ -2.1
RFC4P35249 SNRPGP17-201ENST00000603780 214 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AC098614.4-201ENST00000607601 462 ntBASIC1.91□□□□□ -2.1
RFC4P35249 AC073114.1-201ENST00000612027 490 ntBASIC1.91□□□□□ -2.1
RFC4P35249 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.91□□□□□ -2.1
RFC4P35249 U6.114-201ENST00000636407 96 ntBASIC1.91□□□□□ -2.1
RFC4P35249 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
RFC4P35249 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RFC4P35249 SNORD114-19-201ENST00000363072 75 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-1-201ENST00000383898 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-42P-201ENST00000384165 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-36P-201ENST00000384172 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-4P-201ENST00000384205 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-5P-201ENST00000384238 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-3P-201ENST00000384314 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 SNORD116-20-201ENST00000384529 92 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-2-201ENST00000384627 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-9-201ENST00000384776 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-33P-201ENST00000384793 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RN7SKP142-201ENST00000411236 328 ntBASIC1.9□□□□□ -2.11
RFC4P35249 OR6C66P-201ENST00000414917 930 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AL354695.1-201ENST00000427935 228 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.9□□□□□ -2.11
RFC4P35249 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.9□□□□□ -2.11
RFC4P35249 MTCO2P6-201ENST00000463134 685 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AL121594.1-201ENST00000475906 575 ntBASIC1.9□□□□□ -2.11
RFC4P35249 HMGB1P30-201ENST00000492455 606 ntBASIC1.9□□□□□ -2.11
RFC4P35249 MTCO3P28-201ENST00000513351 515 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.9□□□□□ -2.11
RFC4P35249 BNIP3P6-201ENST00000549284 499 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.9□□□□□ -2.11
RFC4P35249 AC024614.2-201ENST00000577584 372 ntBASIC1.9□□□□□ -2.11
RFC4P35249 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.9□□□□□ -2.11
RFC4P35249 AL713866.2-201ENST00000603579 219 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AC121247.2-201ENST00000604776 136 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AC021646.1-201ENST00000605469 484 ntBASIC1.9□□□□□ -2.11
RFC4P35249 NDUFA8P1-201ENST00000605525 367 ntBASIC1.9□□□□□ -2.11
RFC4P35249 RNU6-6P-201ENST00000606623 107 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AC138649.3-201ENST00000622154 254 ntBASIC1.9□□□□□ -2.11
RFC4P35249 AC078883.4-201ENST00000623218 367 ntBASIC1.9□□□□□ -2.11
RFC4P35249 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.9□□□□□ -2.11
RFC4P35249 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.9□□□□□ -2.11
RFC4P35249 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.9□□□□□ -2.11
RFC4P35249 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RFC4P35249 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RFC4P35249 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.9□□□□□ -2.11
RFC4P35249 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
RFC4P35249 RNU6-1287P-201ENST00000362914 107 ntBASIC1.89□□□□□ -2.11
RFC4P35249 RNU6-529P-201ENST00000363383 104 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms