Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MTND1P26-201ENST00000440488 538 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 AC132479.1-201ENST00000449160 144 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 AC013470.1-201ENST00000453438 462 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 SNRPFP3-201ENST00000457792 225 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 RNA5SP57-201ENST00000459463 123 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA1P35221 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CTNNA1P35221 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.13□□□□□ -2.07
CTNNA1P35221 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA1P35221 AC010486.3-201ENST00000511602 785 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 MTCO2P4-201ENST00000517968 247 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 IGKV3-31-201ENST00000523109 329 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 COPS8P3-201ENST00000526024 482 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA1P35221 AL512310.1-201ENST00000548639 172 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 MIR4672-201ENST00000583126 81 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 VN1R107P-201ENST00000601784 209 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.13□□□□□ -2.07
CTNNA1P35221 AP001596.2-201ENST00000608410 312 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 AL158063.1-201ENST00000615349 536 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 AC097520.1-201ENST00000624435 385 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.13□□□□□ -2.07
CTNNA1P35221 RNU4-15P-201ENST00000362613 141 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 RNU4-56P-201ENST00000364700 142 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CTNNA1P35221 RNU6-142P-201ENST00000384019 107 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 SNORA12-201ENST00000391162 147 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 MTATP6P18-201ENST00000417994 673 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.12□□□□□ -2.07
CTNNA1P35221 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.12□□□□□ -2.07
CTNNA1P35221 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.12□□□□□ -2.07
CTNNA1P35221 AC244670.1-201ENST00000436879 112 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 AL031667.1-201ENST00000440222 725 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.12□□□□□ -2.07
CTNNA1P35221 AL356010.1-201ENST00000456364 102 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 AC105417.1-201ENST00000514691 285 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 Y_RNA.695-201ENST00000516715 107 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 AC069113.1-201ENST00000517763 267 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.12□□□□□ -2.07
CTNNA1P35221 AC009063.1-201ENST00000563342 702 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.12□□□□□ -2.07
CTNNA1P35221 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 IGHVIII-44-202ENST00000636235 289 ntBASIC2.12□□□□□ -2.07
CTNNA1P35221 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CTNNA1P35221 MTND4P14-201ENST00000435799 1354 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CTNNA1P35221 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CTNNA1P35221 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
CTNNA1P35221 RNU6-552P-201ENST00000362869 119 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 RNU6-1120P-201ENST00000362988 108 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 RNU6-23P-201ENST00000363283 107 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 SNORD32B-201ENST00000364460 84 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 Y_RNA.510-201ENST00000384511 114 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 RNU6-160P-201ENST00000384591 107 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 SUMO2P12-201ENST00000405924 140 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 RNA5SP501-201ENST00000410990 112 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 MTCO2P34-201ENST00000421994 607 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AL590135.1-201ENST00000422215 156 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC019205.3-201ENST00000424573 156 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.11□□□□□ -2.07
CTNNA1P35221 AC010975.2-201ENST00000427781 588 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC027124.2-201ENST00000428249 105 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.11□□□□□ -2.07
CTNNA1P35221 AC016700.2-201ENST00000446011 156 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC132942.1-201ENST00000486753 483 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 RN7SL274P-201ENST00000492268 272 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC015911.1-201ENST00000495111 156 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AK3P2-201ENST00000507976 429 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 RN7SKP219-201ENST00000516825 296 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 RNA5SP490-201ENST00000517141 136 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.11□□□□□ -2.07
CTNNA1P35221 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.11□□□□□ -2.07
CTNNA1P35221 AL356057.1-201ENST00000533798 831 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.11□□□□□ -2.07
CTNNA1P35221 ANP32BP3-201ENST00000559213 706 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 MTCO3P23-201ENST00000561363 289 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.11□□□□□ -2.07
CTNNA1P35221 AGGF1P4-201ENST00000568249 801 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 MIR4713-201ENST00000582691 75 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC110760.3-201ENST00000598794 467 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC087752.4-201ENST00000605911 462 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CTNNA1P35221 MIR6873-201ENST00000622788 63 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 AC130454.1-201ENST00000622948 401 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 SCARNA15.3-201ENST00000626315 122 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 SCARNA4.1-201ENST00000628597 123 ntBASIC2.11□□□□□ -2.07
CTNNA1P35221 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CTNNA1P35221 RNY3P9-201ENST00000384727 106 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 RPS29P13-201ENST00000402041 169 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 AL023284.1-201ENST00000403956 276 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 AC008413.1-201ENST00000511864 177 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 MIR449C-201ENST00000516047 92 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 AL137161.1-201ENST00000532231 390 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 MIR3941-201ENST00000582572 103 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.1□□□□□ -2.07
CTNNA1P35221 Z69908.1-201ENST00000622603 247 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
CTNNA1P35221 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CTNNA1P35221 Y_RNA.77-201ENST00000362962 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms