Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 Y_RNA.380-201ENST00000365663 111 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 Y_RNA.527-201ENST00000384573 102 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SLC6A4P31645 AC074117.2-201ENST00000417130 397 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A4P31645 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A4P31645 AL513124.1-201ENST00000450410 614 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 RN7SL330P-201ENST00000469709 307 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 MED28P2-201ENST00000475771 317 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 RPS29P20-201ENST00000489592 171 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC093852.1-201ENST00000503587 266 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC6A4P31645 AC021146.2-201ENST00000504736 556 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 RPL23AP94-201ENST00000512518 302 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC6A4P31645 RNU6-911P-201ENST00000516523 104 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 SNORD19.2-201ENST00000516978 73 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC022616.4-201ENST00000522985 181 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC016256.1-201ENST00000547971 354 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC006199.1-201ENST00000548728 219 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 HSBP1P1-201ENST00000555205 166 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A4P31645 AC009163.5-201ENST00000575421 637 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC019159.1-201ENST00000605094 187 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 MIR4272-201ENST00000635924 64 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 AC241585.2-209ENST00000638217 143 ntBASIC3.27□□□□□ -1.89
SLC6A4P31645 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A4P31645 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A4P31645 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A4P31645 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 RNU6-858P-201ENST00000362436 107 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 RNU6-1309P-201ENST00000363305 108 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 Y_RNA.389-201ENST00000383924 113 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 SNORA7.4-201ENST00000384249 137 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 RNU6-463P-201ENST00000384340 107 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 SAR1AP2-201ENST00000392696 594 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 FTH1P15-201ENST00000406984 280 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 Y_RNA.605-201ENST00000410577 105 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 AL714022.1-201ENST00000439897 151 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A4P31645 AC010099.1-201ENST00000455434 375 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A4P31645 UBE2DNL-203ENST00000474922 222 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC6A4P31645 AP000867.2-201ENST00000532468 320 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A4P31645 AC104581.2-201ENST00000572227 430 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.26□□□□□ -1.89
SLC6A4P31645 VN1R91P-201ENST00000594377 169 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 Z98751.3-201ENST00000604447 521 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 AC092628.2-201ENST00000622492 339 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 AC091903.1-201ENST00000624322 454 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 AC243829.7-201ENST00000633081 225 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A4P31645 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC6A4P31645 AC009541.1-201ENST00000438279 2662 ntBASIC3.26□□□□□ -1.89
SLC6A4P31645 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A4P31645 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A4P31645 AL353743.1-202ENST00000431724 1695 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 Y_RNA.152-201ENST00000363578 100 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 RNU6-198P-201ENST00000384258 104 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 EI24P2-201ENST00000397776 1076 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A4P31645 MIR548F4-201ENST00000408515 105 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 RNA5SP38-201ENST00000410750 119 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 MTCO3P19-201ENST00000415864 321 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A4P31645 AC096644.2-201ENST00000429278 159 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 AC092423.1-201ENST00000430165 186 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A4P31645 AC243964.1-201ENST00000441814 261 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC6A4P31645 AL353752.1-201ENST00000454946 260 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 HMGN1P18-201ENST00000457642 277 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 RPS26P21-201ENST00000475397 348 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A4P31645 RNU5F-8P-201ENST00000515941 111 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 CKS1BP7-201ENST00000522230 235 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A4P31645 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A4P31645 AC113195.1-201ENST00000579952 141 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A4P31645 HMGN2P15-201ENST00000585707 270 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 AC104695.3-201ENST00000604052 296 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 PRR13P7-201ENST00000605538 430 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 SNORD58B-201ENST00000607313 66 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC6A4P31645 7SK.10-201ENST00000621414 298 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC6A4P31645 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A4P31645 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC6A4P31645 AC004944.1-201ENST00000517807 3059 ntBASIC3.25□□□□□ -1.89
SLC6A4P31645 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A4P31645 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC6A4P31645 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SLC6A4P31645 AC233263.6-201ENST00000631132 1963 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms