Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL592221.1-201ENST00000605266 382 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 AC024060.1-201ENST00000607052 494 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 AC130324.3-201ENST00000614165 542 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 AL359547.2-201ENST00000615810 418 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 AC009269.6-201ENST00000621778 588 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.82□□□□□ -2.28
COL4A5P29400 AC067863.3-201ENST00000624172 122 ntBASIC0.82□□□□□ -2.28
COL4A5P29400 SNORD3E-201ENST00000362899 217 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 RNY3P13-201ENST00000365542 102 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 RNU5E-6P-201ENST00000365574 115 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 RNU6-817P-201ENST00000391083 104 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AL136310.1-201ENST00000404926 654 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 Y_RNA.597-201ENST00000410463 100 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 Y_RNA.623-201ENST00000411128 95 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 VPS26BP1-201ENST00000417155 755 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AL590556.1-201ENST00000423231 483 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A5P29400 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A5P29400 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A5P29400 AC079448.1-201ENST00000449377 373 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC104629.1-201ENST00000494226 508 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC079140.2-201ENST00000506193 142 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC093259.1-201ENST00000509755 300 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 RNU6-496P-201ENST00000516145 99 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 RNU6-965P-201ENST00000516721 96 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 RNU6-677P-201ENST00000516914 101 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A5P29400 AC073410.2-201ENST00000603240 332 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 MIR15A-201ENST00000607334 83 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A5P29400 AC013437.2-201ENST00000639587 677 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
COL4A5P29400 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.81□□□□□ -2.28
COL4A5P29400 MIR412-201ENST00000362142 91 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 Y_RNA.99-201ENST00000363138 105 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 Y_RNA.167-201ENST00000363735 109 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 RNU6-960P-201ENST00000364056 120 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 SNORD26-201ENST00000384147 75 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 RNU2-7P-201ENST00000410794 178 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.81□□□□□ -2.28
COL4A5P29400 SDAD1P3-201ENST00000427380 333 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.81□□□□□ -2.28
COL4A5P29400 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A5P29400 AC068587.4-201ENST00000533893 186 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.81□□□□□ -2.28
COL4A5P29400 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.81□□□□□ -2.28
COL4A5P29400 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.81□□□□□ -2.28
COL4A5P29400 AL606834.3-201ENST00000602615 496 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC131235.4-201ENST00000609288 620 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.81□□□□□ -2.28
COL4A5P29400 AL121890.5-201ENST00000620848 304 ntBASIC0.81□□□□□ -2.28
COL4A5P29400 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 AC073343.1-201ENST00000328239 651 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 SNORD33-201ENST00000362761 85 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 RNU6-655P-201ENST00000362858 107 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 RNU6-944P-201ENST00000364023 107 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 RNU5A-8P-201ENST00000364102 114 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 RNU6-743P-201ENST00000364151 106 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 SMIM11P1-201ENST00000369586 178 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 Y_RNA.465-201ENST00000384293 102 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 AC137499.1-201ENST00000427602 88 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.8□□□□□ -2.28
COL4A5P29400 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.8□□□□□ -2.28
COL4A5P29400 AP000542.1-201ENST00000448473 371 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 RNA5SP269-201ENST00000459032 137 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 snoU109.2-201ENST00000459316 135 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.8□□□□□ -2.28
COL4A5P29400 AC112198.4-201ENST00000515450 351 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.8□□□□□ -2.28
COL4A5P29400 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.8□□□□□ -2.28
COL4A5P29400 AC243829.3-201ENST00000622177 108 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 MIR338-201ENST00000636369 67 ntBASIC0.8□□□□□ -2.28
COL4A5P29400 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.8□□□□□ -2.28
COL4A5P29400 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
COL4A5P29400 snoU2_19.1-201ENST00000362361 80 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 Y_RNA.33-201ENST00000362591 102 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 RNA5SP493-201ENST00000364115 91 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 RNA5SP331-201ENST00000364986 107 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
COL4A5P29400 MIR1267-201ENST00000408723 78 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 AC069282.1-201ENST00000411911 526 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 RPL30P13-201ENST00000418873 348 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 HSPE1P21-201ENST00000438283 308 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A5P29400 AL606517.1-201ENST00000446914 387 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 NDUFB1P2-201ENST00000449477 176 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 AC006026.2-201ENST00000457376 180 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 snoU13.14-201ENST00000459372 104 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A5P29400 AC018630.3-201ENST00000542637 96 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.79□□□□□ -2.28
COL4A5P29400 RRN3P3-201ENST00000549207 578 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 AC136618.2-201ENST00000575091 400 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 AL596327.1-201ENST00000603629 213 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 AP001485.1-201ENST00000604799 199 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 AC093788.1-201ENST00000609356 927 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 AL159153.1-201ENST00000619688 317 ntBASIC0.79□□□□□ -2.28
COL4A5P29400 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
COL4A5P29400 AC106858.1-201ENST00000637497 429 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms