Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TNFSF4P23510 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TNFSF4P23510 RNU4-15P-201ENST00000362613 141 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 RNU1-33P-201ENST00000364249 162 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 Y_RNA.259-201ENST00000364619 101 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 RNU4-9P-201ENST00000364951 139 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 SNORA36A-201ENST00000384221 132 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 Y_RNA.473-201ENST00000384333 102 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 MIR183-201ENST00000384958 110 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 MIR34B-201ENST00000385076 84 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 MTCYBP2-201ENST00000407745 171 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 RNA5SP293-201ENST00000410527 113 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 Y_RNA.653-201ENST00000459091 95 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 Y_RNA.632-201ENST00000459189 102 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 RN7SL442P-201ENST00000473804 320 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 AC110794.1-201ENST00000505816 425 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 Y_RNA.675-201ENST00000516389 149 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 RPPH1-2P-201ENST00000516688 293 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 SNORA48.11-201ENST00000517015 89 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 IGKV2-26-201ENST00000518305 343 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 AC005520.5-201ENST00000613926 164 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 AL157817.1-201ENST00000614264 790 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFSF4P23510 AL359697.1-201ENST00000624879 587 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFSF4P23510 U6.105-201ENST00000637379 88 ntBASIC2.87□□□□□ -1.95
TNFSF4P23510 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TNFSF4P23510 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFSF4P23510 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFSF4P23510 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFSF4P23510 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFSF4P23510 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TNFSF4P23510 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
TNFSF4P23510 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFSF4P23510 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFSF4P23510 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFSF4P23510 SNORA71.3-201ENST00000362582 128 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 RNU6-1159P-201ENST00000362933 107 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFSF4P23510 DYNLT3P1-201ENST00000378574 347 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 Y_RNA.404-201ENST00000383978 102 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 Y_RNA.533-201ENST00000384596 114 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 RNA5SP171-201ENST00000391071 115 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 RPL21P75-201ENST00000396599 483 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 RPL21P28-201ENST00000401418 483 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 RPS26P42-201ENST00000413485 326 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AC243428.1-201ENST00000421099 264 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AL358453.1-201ENST00000422522 250 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AP000907.1-201ENST00000428428 510 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AC006028.1-201ENST00000438379 402 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.86□□□□□ -1.95
TNFSF4P23510 RN7SKP210-201ENST00000459176 261 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 RPL21P39-201ENST00000463605 483 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AC087190.1-201ENST00000484462 480 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AC093591.1-201ENST00000491435 481 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 RPL23AP75-201ENST00000491601 451 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.86□□□□□ -1.95
TNFSF4P23510 RPL21P16-201ENST00000495531 483 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AC145146.1-201ENST00000496370 254 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AC093027.1-201ENST00000546698 429 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFSF4P23510 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFSF4P23510 MIR4795-201ENST00000584182 89 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 BNIP3P22-201ENST00000593399 556 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 AL355297.2-201ENST00000604792 129 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 RPL23AP88-201ENST00000605759 454 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 MIR7975-201ENST00000619350 68 ntBASIC2.86□□□□□ -1.95
TNFSF4P23510 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
TNFSF4P23510 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.85□□□□□ -1.95
TNFSF4P23510 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
TNFSF4P23510 Y_RNA.67-201ENST00000362870 100 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 RNU6-595P-201ENST00000363944 107 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 RNA5SP125-201ENST00000364843 120 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 RNU6-1032P-201ENST00000384100 107 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 RNU6-1274P-201ENST00000384557 107 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TNFSF4P23510 RNY4P36-201ENST00000391116 96 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 RNA5SP201-201ENST00000410316 124 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 AL356968.1-201ENST00000416622 474 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 RPL21P2-201ENST00000440049 481 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.85□□□□□ -1.95
TNFSF4P23510 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFSF4P23510 AC010401.1-201ENST00000463867 348 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 AF186996.7-201ENST00000492781 209 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.85□□□□□ -1.95
TNFSF4P23510 AC097473.1-201ENST00000508142 408 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 CBX3P8-201ENST00000532412 525 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFSF4P23510 AC007458.1-201ENST00000542812 373 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 AL158827.2-201ENST00000602494 330 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 C8orf59P2-201ENST00000603441 271 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 AC073657.2-201ENST00000605661 303 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFSF4P23510 U4atac.1-201ENST00000618345 95 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 AL691447.3-201ENST00000635020 330 ntBASIC2.85□□□□□ -1.95
TNFSF4P23510 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TNFSF4P23510 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms