Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.92□□□□□ -2.1
XRCC1P18887 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.92□□□□□ -2.1
XRCC1P18887 RPL39P29-201ENST00000447779 157 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.92□□□□□ -2.1
XRCC1P18887 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 RPL30P1-201ENST00000488676 339 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.92□□□□□ -2.1
XRCC1P18887 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.92□□□□□ -2.1
XRCC1P18887 AC091133.4-201ENST00000511142 308 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 RNA5SP137-201ENST00000516833 135 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.92□□□□□ -2.1
XRCC1P18887 AC069113.1-201ENST00000517763 267 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AP001893.2-201ENST00000526949 202 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AC115990.1-201ENST00000526957 301 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.92□□□□□ -2.1
XRCC1P18887 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.92□□□□□ -2.1
XRCC1P18887 AC091135.1-201ENST00000585943 307 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 AC008752.3-201ENST00000588113 712 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
XRCC1P18887 AC007684.1-201ENST00000609671 477 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 SDR42E1P4-201ENST00000620894 481 ntBASIC1.92□□□□□ -2.1
XRCC1P18887 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
XRCC1P18887 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-37P-201ENST00000362692 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-552P-201ENST00000362869 119 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-105P-201ENST00000363909 104 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-11P-201ENST00000364234 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-996P-201ENST00000365438 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-25P-201ENST00000383873 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-1-201ENST00000383898 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-48P-201ENST00000384161 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-36P-201ENST00000384172 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-4P-201ENST00000384205 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-5P-201ENST00000384238 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-3P-201ENST00000384314 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 SNORD116-1-201ENST00000384335 95 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-16P-201ENST00000384385 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-15P-201ENST00000384534 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-2-201ENST00000384627 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-29P-201ENST00000384637 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-9-201ENST00000384776 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-33P-201ENST00000384793 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 SNORD56-201ENST00000413522 71 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 EDDM3CP-201ENST00000415977 425 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 USP9YP18-201ENST00000425912 695 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 MTCO2P19-201ENST00000427513 598 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.91□□□□□ -2.1
XRCC1P18887 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.91□□□□□ -2.1
XRCC1P18887 AC108078.1-201ENST00000508073 725 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.91□□□□□ -2.1
XRCC1P18887 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.91□□□□□ -2.1
XRCC1P18887 RNU7-193P-201ENST00000516723 65 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 AC034114.1-201ENST00000520293 285 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 COPS8P3-201ENST00000526024 482 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 AP003034.1-201ENST00000534621 422 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 NDUFA5P6-201ENST00000542110 379 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.91□□□□□ -2.1
XRCC1P18887 MTATP6P3-201ENST00000581686 676 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 PIGPP4-201ENST00000584447 307 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 NBR2-204ENST00000587322 63 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 AC078899.2-201ENST00000595282 212 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 VN1R107P-201ENST00000601784 209 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 RNU6-6P-201ENST00000606623 107 ntBASIC1.91□□□□□ -2.1
XRCC1P18887 AC009487.4-201ENST00000624969 3585 ntBASIC1.9□□□□□ -2.1
XRCC1P18887 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
XRCC1P18887 AL356292.1-201ENST00000283110 373 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 Y_RNA.1-201ENST00000352915 104 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 Y_RNA.40-201ENST00000362645 93 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 RNU6-1303P-201ENST00000364841 107 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 RNU6-1032P-201ENST00000384100 107 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 SNORA40.19-201ENST00000390846 128 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 DEFB108C-201ENST00000400154 252 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
XRCC1P18887 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.9□□□□□ -2.11
XRCC1P18887 snoU13.23-201ENST00000458863 104 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 RNU7-167P-201ENST00000459160 62 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 RPL30P12-201ENST00000474666 353 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AL163973.1-201ENST00000484753 577 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.9□□□□□ -2.11
XRCC1P18887 SNORA25.17-201ENST00000517184 124 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 HIF1AP1-201ENST00000553642 175 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.9□□□□□ -2.11
XRCC1P18887 AC026271.5-201ENST00000577873 130 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 BNIP3P16-201ENST00000589779 534 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AC004223.2-201ENST00000590309 544 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AC012507.3-201ENST00000603556 477 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AL391646.1-201ENST00000603860 190 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 AC241585.2-209ENST00000638217 143 ntBASIC1.9□□□□□ -2.11
XRCC1P18887 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.9□□□□□ -2.11
XRCC1P18887 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
XRCC1P18887 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
XRCC1P18887 RNU1-23P-201ENST00000363361 144 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 Y_RNA.359-201ENST00000365498 102 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 SNORD116-2-201ENST00000384274 95 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 RNU6-1119P-201ENST00000384349 108 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 SNORD116-6-201ENST00000384711 96 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 AL591034.2-201ENST00000402839 359 ntBASIC1.89□□□□□ -2.11
XRCC1P18887 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms