Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.26□□□□□ -1.73
LIG1P18858 KLKP1-201ENST00000595979 403 ntBASIC4.26□□□□□ -1.73
LIG1P18858 AC010620.2-201ENST00000600135 313 ntBASIC4.26□□□□□ -1.73
LIG1P18858 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.26□□□□□ -1.73
LIG1P18858 AC002076.2-201ENST00000617362 122 ntBASIC4.26□□□□□ -1.73
LIG1P18858 AC006111.3-201ENST00000622137 383 ntBASIC4.26□□□□□ -1.73
LIG1P18858 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.26□□□□□ -1.73
LIG1P18858 RNU6-682P-201ENST00000363843 106 ntBASIC4.25□□□□□ -1.73
LIG1P18858 RNY4P28-201ENST00000365281 93 ntBASIC4.25□□□□□ -1.73
LIG1P18858 RNU6-843P-201ENST00000384454 104 ntBASIC4.25□□□□□ -1.73
LIG1P18858 RNU6-125P-201ENST00000384505 107 ntBASIC4.25□□□□□ -1.73
LIG1P18858 RPS4XP3-201ENST00000398541 413 ntBASIC4.25□□□□□ -1.73
LIG1P18858 Y_RNA.626-201ENST00000411288 95 ntBASIC4.25□□□□□ -1.73
LIG1P18858 RPL30P1-201ENST00000488676 339 ntBASIC4.25□□□□□ -1.73
LIG1P18858 SCARNA14-201ENST00000516903 136 ntBASIC4.25□□□□□ -1.73
LIG1P18858 AC093331.1-201ENST00000521474 169 ntBASIC4.25□□□□□ -1.73
LIG1P18858 AC024405.2-202ENST00000532731 184 ntBASIC4.25□□□□□ -1.73
LIG1P18858 AC008011.1-201ENST00000545989 227 ntBASIC4.25□□□□□ -1.73
LIG1P18858 LINC00933-203ENST00000559812 219 ntBASIC4.25□□□□□ -1.73
LIG1P18858 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.25□□□□□ -1.73
LIG1P18858 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
LIG1P18858 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LIG1P18858 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LIG1P18858 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LIG1P18858 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIG1P18858 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.24□□□□□ -1.73
LIG1P18858 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIG1P18858 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
LIG1P18858 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.24□□□□□ -1.73
LIG1P18858 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIG1P18858 Z98749.2-208ENST00000381646 500 ntBASIC4.24□□□□□ -1.73
LIG1P18858 Y_RNA.506-201ENST00000384494 102 ntBASIC4.24□□□□□ -1.73
LIG1P18858 MIR32-201ENST00000384965 70 ntBASIC4.24□□□□□ -1.73
LIG1P18858 MIR518D-201ENST00000385014 87 ntBASIC4.24□□□□□ -1.73
LIG1P18858 MIR153-2-201ENST00000385225 87 ntBASIC4.24□□□□□ -1.73
LIG1P18858 SNORA48.8-201ENST00000391324 134 ntBASIC4.24□□□□□ -1.73
LIG1P18858 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIG1P18858 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.24□□□□□ -1.73
LIG1P18858 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIG1P18858 MTATP6P7-201ENST00000453315 681 ntBASIC4.24□□□□□ -1.73
LIG1P18858 RPL23AP49-201ENST00000492925 468 ntBASIC4.24□□□□□ -1.73
LIG1P18858 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.24□□□□□ -1.73
LIG1P18858 RNU6-1114P-201ENST00000516022 107 ntBASIC4.24□□□□□ -1.73
LIG1P18858 RNU2-31P-201ENST00000516954 155 ntBASIC4.24□□□□□ -1.73
LIG1P18858 CYCSP30-201ENST00000546447 172 ntBASIC4.24□□□□□ -1.73
LIG1P18858 AK6P2-201ENST00000549020 471 ntBASIC4.24□□□□□ -1.73
LIG1P18858 AC006130.2-201ENST00000586202 326 ntBASIC4.24□□□□□ -1.73
LIG1P18858 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.24□□□□□ -1.73
LIG1P18858 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LIG1P18858 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LIG1P18858 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIG1P18858 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIG1P18858 AL353743.1-202ENST00000431724 1695 ntBASIC4.23□□□□□ -1.73
LIG1P18858 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LIG1P18858 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.23□□□□□ -1.73
LIG1P18858 RNU6-879P-201ENST00000364328 108 ntBASIC4.23□□□□□ -1.73
LIG1P18858 SNORA62.3-201ENST00000365110 153 ntBASIC4.23□□□□□ -1.73
LIG1P18858 RNU6-926P-201ENST00000384075 107 ntBASIC4.23□□□□□ -1.73
LIG1P18858 SNORA3.3-201ENST00000408712 125 ntBASIC4.23□□□□□ -1.73
LIG1P18858 RNU6-1140P-201ENST00000410517 106 ntBASIC4.23□□□□□ -1.73
LIG1P18858 RNU5A-5P-201ENST00000411054 116 ntBASIC4.23□□□□□ -1.73
LIG1P18858 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.23□□□□□ -1.73
LIG1P18858 AC243964.1-201ENST00000441814 261 ntBASIC4.23□□□□□ -1.73
LIG1P18858 AL031659.1-201ENST00000447075 539 ntBASIC4.23□□□□□ -1.73
LIG1P18858 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.23□□□□□ -1.73
LIG1P18858 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.23□□□□□ -1.73
LIG1P18858 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.23□□□□□ -1.73
LIG1P18858 SNORA84-201ENST00000459229 133 ntBASIC4.23□□□□□ -1.73
LIG1P18858 AP000870.1-201ENST00000472927 406 ntBASIC4.23□□□□□ -1.73
LIG1P18858 MRPL42P6-201ENST00000486397 371 ntBASIC4.23□□□□□ -1.73
LIG1P18858 RNU6-1183P-201ENST00000517054 60 ntBASIC4.23□□□□□ -1.73
LIG1P18858 AC087441.2-201ENST00000529141 262 ntBASIC4.23□□□□□ -1.73
LIG1P18858 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.23□□□□□ -1.73
LIG1P18858 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.23□□□□□ -1.73
LIG1P18858 AC016256.1-201ENST00000547971 354 ntBASIC4.23□□□□□ -1.73
LIG1P18858 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.23□□□□□ -1.73
LIG1P18858 MIR4423-201ENST00000580922 80 ntBASIC4.23□□□□□ -1.73
LIG1P18858 AL162424.1-201ENST00000602325 221 ntBASIC4.23□□□□□ -1.73
LIG1P18858 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.23□□□□□ -1.73
LIG1P18858 AL356157.2-201ENST00000605122 111 ntBASIC4.23□□□□□ -1.73
LIG1P18858 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.23□□□□□ -1.73
LIG1P18858 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIG1P18858 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.23□□□□□ -1.73
LIG1P18858 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.22□□□□□ -1.73
LIG1P18858 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIG1P18858 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.22□□□□□ -1.73
LIG1P18858 RNU6-942P-201ENST00000363002 107 ntBASIC4.22□□□□□ -1.73
LIG1P18858 Y_RNA.122-201ENST00000363331 96 ntBASIC4.22□□□□□ -1.73
LIG1P18858 AL359837.1-201ENST00000381357 287 ntBASIC4.22□□□□□ -1.73
LIG1P18858 RNU6-140P-201ENST00000384566 108 ntBASIC4.22□□□□□ -1.73
LIG1P18858 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LIG1P18858 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIG1P18858 SNORA11-201ENST00000408789 128 ntBASIC4.22□□□□□ -1.73
LIG1P18858 RN7SKP27-201ENST00000410684 333 ntBASIC4.22□□□□□ -1.73
LIG1P18858 SNORA57.3-201ENST00000411095 141 ntBASIC4.22□□□□□ -1.73
LIG1P18858 COX6CP10-201ENST00000416832 224 ntBASIC4.22□□□□□ -1.73
LIG1P18858 AC096638.1-201ENST00000444678 216 ntBASIC4.22□□□□□ -1.73
LIG1P18858 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.22□□□□□ -1.73
LIG1P18858 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.22□□□□□ -1.73
LIG1P18858 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms