Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MIR200A-201ENST00000384875 90 ntBASIC0.3□□□□□ -2.36
CFTRP13569 MIR548B-201ENST00000385247 97 ntBASIC0.3□□□□□ -2.36
CFTRP13569 RPS3AP1-201ENST00000413190 320 ntBASIC0.3□□□□□ -2.36
CFTRP13569 MTND4P24-201ENST00000424002 397 ntBASIC0.3□□□□□ -2.36
CFTRP13569 CETN4P-201ENST00000432407 469 ntBASIC0.3□□□□□ -2.36
CFTRP13569 AC012308.1-201ENST00000451232 178 ntBASIC0.3□□□□□ -2.36
CFTRP13569 RPS27AP8-201ENST00000452665 445 ntBASIC0.3□□□□□ -2.36
CFTRP13569 snoU13.19-201ENST00000459148 104 ntBASIC0.3□□□□□ -2.36
CFTRP13569 AC091860.1-201ENST00000505723 432 ntBASIC0.3□□□□□ -2.36
CFTRP13569 RNA5SP168-201ENST00000516642 112 ntBASIC0.3□□□□□ -2.36
CFTRP13569 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.3□□□□□ -2.36
CFTRP13569 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.3□□□□□ -2.36
CFTRP13569 BNIP3P31-201ENST00000604515 566 ntBASIC0.3□□□□□ -2.36
CFTRP13569 SNORD114-15-201ENST00000364687 72 ntBASIC0.29□□□□□ -2.36
CFTRP13569 MIR194-1-201ENST00000384892 85 ntBASIC0.29□□□□□ -2.36
CFTRP13569 SNORD65C-201ENST00000390962 71 ntBASIC0.29□□□□□ -2.36
CFTRP13569 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.29□□□□□ -2.36
CFTRP13569 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.29□□□□□ -2.36
CFTRP13569 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.29□□□□□ -2.36
CFTRP13569 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.29□□□□□ -2.36
CFTRP13569 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.29□□□□□ -2.36
CFTRP13569 RNU6-333P-201ENST00000459117 107 ntBASIC0.29□□□□□ -2.36
CFTRP13569 TMEM251P1-201ENST00000503717 318 ntBASIC0.29□□□□□ -2.36
CFTRP13569 AC097473.1-201ENST00000508142 408 ntBASIC0.29□□□□□ -2.36
CFTRP13569 RNU6-758P-201ENST00000516292 89 ntBASIC0.29□□□□□ -2.36
CFTRP13569 RNA5SP481-201ENST00000516814 122 ntBASIC0.29□□□□□ -2.36
CFTRP13569 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.29□□□□□ -2.36
CFTRP13569 MIR4305-201ENST00000583252 102 ntBASIC0.29□□□□□ -2.36
CFTRP13569 AP001981.2-201ENST00000603241 418 ntBASIC0.29□□□□□ -2.36
CFTRP13569 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.29□□□□□ -2.36
CFTRP13569 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CFTRP13569 AC023934.1-201ENST00000574529 2389 ntBASIC0.29□□□□□ -2.36
CFTRP13569 RNU6-655P-201ENST00000362858 107 ntBASIC0.29□□□□□ -2.36
CFTRP13569 RNU6-359P-201ENST00000365466 108 ntBASIC0.29□□□□□ -2.36
CFTRP13569 MIR29B2-201ENST00000385055 81 ntBASIC0.29□□□□□ -2.36
CFTRP13569 RNU6-796P-201ENST00000391086 107 ntBASIC0.29□□□□□ -2.36
CFTRP13569 CBX3P9-201ENST00000402326 552 ntBASIC0.29□□□□□ -2.36
CFTRP13569 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.29□□□□□ -2.36
CFTRP13569 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.29□□□□□ -2.36
CFTRP13569 AC092427.1-201ENST00000439177 601 ntBASIC0.29□□□□□ -2.36
CFTRP13569 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.29□□□□□ -2.36
CFTRP13569 AC018659.1-201ENST00000551083 169 ntBASIC0.29□□□□□ -2.36
CFTRP13569 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.29□□□□□ -2.36
CFTRP13569 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CFTRP13569 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.28□□□□□ -2.36
CFTRP13569 RNU6-858P-201ENST00000362436 107 ntBASIC0.28□□□□□ -2.37
CFTRP13569 RNU6-188P-201ENST00000364207 107 ntBASIC0.28□□□□□ -2.37
CFTRP13569 Y_RNA.234-201ENST00000364409 97 ntBASIC0.28□□□□□ -2.37
CFTRP13569 RNU6-432P-201ENST00000384196 109 ntBASIC0.28□□□□□ -2.37
CFTRP13569 MIR217-201ENST00000384817 110 ntBASIC0.28□□□□□ -2.37
CFTRP13569 AC063976.4-201ENST00000421971 163 ntBASIC0.28□□□□□ -2.37
CFTRP13569 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.28□□□□□ -2.37
CFTRP13569 AC002429.1-201ENST00000437672 148 ntBASIC0.28□□□□□ -2.37
CFTRP13569 MTATP6P30-201ENST00000443540 664 ntBASIC0.28□□□□□ -2.37
CFTRP13569 MTCO2P25-201ENST00000447065 681 ntBASIC0.28□□□□□ -2.37
CFTRP13569 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.28□□□□□ -2.37
CFTRP13569 AC010631.1-201ENST00000474150 156 ntBASIC0.28□□□□□ -2.37
CFTRP13569 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.28□□□□□ -2.37
CFTRP13569 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.28□□□□□ -2.37
CFTRP13569 RNU6-714P-201ENST00000516963 103 ntBASIC0.28□□□□□ -2.37
CFTRP13569 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.28□□□□□ -2.37
CFTRP13569 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.28□□□□□ -2.37
CFTRP13569 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.28□□□□□ -2.37
CFTRP13569 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.28□□□□□ -2.37
CFTRP13569 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.28□□□□□ -2.37
CFTRP13569 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CFTRP13569 Y_RNA.124-201ENST00000363339 93 ntBASIC0.27□□□□□ -2.37
CFTRP13569 RNY4P3-201ENST00000365254 95 ntBASIC0.27□□□□□ -2.37
CFTRP13569 SUGT1P1-201ENST00000379514 476 ntBASIC0.27□□□□□ -2.37
CFTRP13569 BX119904.4-201ENST00000424402 301 ntBASIC0.27□□□□□ -2.37
CFTRP13569 TXNL1P1-201ENST00000429528 554 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AC099677.2-201ENST00000436385 175 ntBASIC0.27□□□□□ -2.37
CFTRP13569 MTCO3P45-201ENST00000443036 613 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AL358794.1-201ENST00000445689 381 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.27□□□□□ -2.37
CFTRP13569 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.27□□□□□ -2.37
CFTRP13569 MTND2P6-201ENST00000455337 1030 ntBASIC0.27□□□□□ -2.37
CFTRP13569 RNU1-131P-201ENST00000458943 161 ntBASIC0.27□□□□□ -2.37
CFTRP13569 CYCTP-201ENST00000504253 315 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AC093809.1-201ENST00000509155 340 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.27□□□□□ -2.37
CFTRP13569 AC087897.1-201ENST00000550134 156 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AL121579.1-201ENST00000555129 305 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AC008759.3-201ENST00000613300 508 ntBASIC0.27□□□□□ -2.37
CFTRP13569 LINC02555-201ENST00000563933 1951 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AC010615.1-201ENST00000594254 1764 ntBASIC0.27□□□□□ -2.37
CFTRP13569 AL391994.1-201ENST00000254724 282 ntBASIC0.26□□□□□ -2.37
CFTRP13569 SNORD18A-201ENST00000363753 72 ntBASIC0.26□□□□□ -2.37
CFTRP13569 RNU6-1210P-201ENST00000363775 107 ntBASIC0.26□□□□□ -2.37
CFTRP13569 RNU6-910P-201ENST00000390844 107 ntBASIC0.26□□□□□ -2.37
CFTRP13569 RNA5SP437-201ENST00000517249 129 ntBASIC0.26□□□□□ -2.37
CFTRP13569 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.26□□□□□ -2.37
CFTRP13569 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.26□□□□□ -2.37
CFTRP13569 AC093012.1-202ENST00000549403 582 ntBASIC0.26□□□□□ -2.37
CFTRP13569 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.26□□□□□ -2.37
CFTRP13569 AC107304.1-201ENST00000604229 296 ntBASIC0.26□□□□□ -2.37
CFTRP13569 AC130324.3-201ENST00000614165 542 ntBASIC0.26□□□□□ -2.37
CFTRP13569 AC106858.1-201ENST00000637497 429 ntBASIC0.26□□□□□ -2.37
CFTRP13569 SNORD56.4-201ENST00000363883 71 ntBASIC0.25□□□□□ -2.37
CFTRP13569 RNU6-348P-201ENST00000384386 107 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 493 ms