Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNRPGP20-201ENST00000604477 205 ntBASIC-0□□□□□ -2.41
COL6A3P12111 AC069304.2-201ENST00000605154 435 ntBASIC-0□□□□□ -2.41
COL6A3P12111 AC097065.2-201ENST00000608159 533 ntBASIC-0□□□□□ -2.41
COL6A3P12111 AC104465.1-201ENST00000611365 139 ntBASIC-0□□□□□ -2.41
COL6A3P12111 uc_338.36-201ENST00000622331 158 ntBASIC-0□□□□□ -2.41
COL6A3P12111 AC009950.2-201ENST00000636548 183 ntBASIC-0□□□□□ -2.41
COL6A3P12111 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 SNORD44.1-201ENST00000363202 61 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.01□□□□□ -2.41
COL6A3P12111 MIR200A-201ENST00000384875 90 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 DSTNP4-201ENST00000399472 474 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 TAF9BP2-201ENST00000400856 499 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 MIR1262-201ENST00000408276 93 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 RNU2-43P-201ENST00000410306 190 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 BTF3P8-201ENST00000414577 526 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL6A3P12111 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.01□□□□□ -2.41
COL6A3P12111 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL6A3P12111 AC048334.1-201ENST00000477975 159 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 PDCD5P2-201ENST00000507570 312 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.01□□□□□ -2.41
COL6A3P12111 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.01□□□□□ -2.41
COL6A3P12111 BNIP3P39-201ENST00000601077 554 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 AC090772.4-201ENST00000623599 362 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.01□□□□□ -2.41
COL6A3P12111 RNU6-858P-201ENST00000362436 107 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 RNA5SP128-201ENST00000365305 116 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 SNORD89-201ENST00000390981 114 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-0.01□□□□□ -2.41
COL6A3P12111 AL049734.2-201ENST00000441066 616 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 RPL31P53-201ENST00000457065 348 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 AC112771.1-201ENST00000463581 102 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 AC010631.1-201ENST00000474150 156 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 RPL36AP48-201ENST00000485521 314 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 AC093303.1-201ENST00000514549 295 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 RNY4P37-201ENST00000516225 96 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.01□□□□□ -2.41
COL6A3P12111 MIR5094-201ENST00000578766 85 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 AC012065.4-201ENST00000602445 679 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 AC112220.3-201ENST00000605502 502 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.01□□□□□ -2.41
COL6A3P12111 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
COL6A3P12111 MIR103A1-201ENST00000362165 78 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 SNORD115-24-201ENST00000363528 82 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RNU6-217P-201ENST00000384164 104 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RNU6-98P-201ENST00000384173 107 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 SNORD14D-201ENST00000384390 87 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RNU6-110P-201ENST00000384508 104 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 MIR514A1-201ENST00000385133 98 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AC119751.3-201ENST00000399720 670 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL6A3P12111 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RPL30P7-201ENST00000479312 323 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AC108740.1-201ENST00000498629 225 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL6A3P12111 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL6A3P12111 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL6A3P12111 AL357312.1-201ENST00000603879 298 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AL355802.4-201ENST00000607635 548 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AL353149.1-201ENST00000610667 244 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AC011939.3-201ENST00000613686 466 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 MIR7844-201ENST00000616161 122 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AL590240.4-201ENST00000616908 390 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
COL6A3P12111 RNU6-910P-201ENST00000390844 107 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RNU6-233P-201ENST00000410845 141 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL6A3P12111 AC139712.2-201ENST00000424302 339 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AL589872.1-201ENST00000426602 288 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RPL26P6-201ENST00000440913 438 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 BUD31P2-201ENST00000449374 300 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AC084024.2-201ENST00000503480 791 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AC008494.2-201ENST00000514544 370 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.02□□□□□ -2.41
COL6A3P12111 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL6A3P12111 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL6A3P12111 AL137246.1-201ENST00000607072 977 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AL365434.2-201ENST00000607979 234 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AC005021.1-201ENST00000608730 355 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL6A3P12111 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL6A3P12111 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL6A3P12111 RNU4-16P-201ENST00000364737 141 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 SNORD12-201ENST00000391002 90 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RPL22P22-201ENST00000395439 379 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 AF228730.1-201ENST00000397972 663 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RNA5SP100-201ENST00000410903 110 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 RNA5SP59-201ENST00000410922 110 ntBASIC-0.02□□□□□ -2.41
COL6A3P12111 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL6A3P12111 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms