Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AC079140.2-201ENST00000506193 142 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 AC097473.1-201ENST00000508142 408 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 ATP5EP1-201ENST00000510257 156 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 MIR449C-201ENST00000516047 92 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 RNA5SP337-201ENST00000517007 109 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.75□□□□□ -2.29
UBBP0CG47 ZNF519P3-201ENST00000557158 1032 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 AC136932.1-201ENST00000574771 208 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 AL139418.1-201ENST00000613613 177 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 MIR8063-201ENST00000621930 81 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.75□□□□□ -2.29
UBBP0CG47 ICE2P2-201ENST00000483823 2787 ntBASIC0.75□□□□□ -2.29
UBBP0CG47 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
UBBP0CG47 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
UBBP0CG47 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
UBBP0CG47 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 SNORA63D-201ENST00000364359 132 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 RNU6-39P-201ENST00000384344 107 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 MIR194-1-201ENST00000384892 85 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 MIR764-201ENST00000390811 85 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 SNORA12.2-201ENST00000391040 156 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 AL357139.1-201ENST00000407792 426 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 AC123900.1-201ENST00000420390 96 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.74□□□□□ -2.29
UBBP0CG47 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.74□□□□□ -2.29
UBBP0CG47 RPS27AP8-201ENST00000452665 445 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.74□□□□□ -2.29
UBBP0CG47 HMGN2P9-201ENST00000476875 229 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 MTND2P33-201ENST00000506452 1031 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 RNU6-123P-201ENST00000516163 102 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.74□□□□□ -2.29
UBBP0CG47 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.74□□□□□ -2.29
UBBP0CG47 AC073539.2-201ENST00000597113 165 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 AL034555.1-201ENST00000604816 211 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 MIR6857-201ENST00000613267 93 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 AC103706.2-201ENST00000638080 240 ntBASIC0.74□□□□□ -2.29
UBBP0CG47 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.73□□□□□ -2.29
UBBP0CG47 RNU4-68P-201ENST00000364314 141 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 Y_RNA.302-201ENST00000364997 102 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBBP0CG47 RNU6-157P-201ENST00000383957 107 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 SNORA40.4-201ENST00000390971 128 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 AC114491.1-201ENST00000416095 246 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 EIF1P1-201ENST00000421436 341 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
UBBP0CG47 HSPE1P9-201ENST00000440046 311 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 PGBD4P5-201ENST00000445958 426 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.73□□□□□ -2.29
UBBP0CG47 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.73□□□□□ -2.29
UBBP0CG47 AC006026.2-201ENST00000457376 180 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 AC114982.1-201ENST00000469402 321 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.73□□□□□ -2.29
UBBP0CG47 AC108078.2-201ENST00000510750 236 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 RNU7-51P-201ENST00000516560 62 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.73□□□□□ -2.29
UBBP0CG47 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.73□□□□□ -2.29
UBBP0CG47 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.73□□□□□ -2.29
UBBP0CG47 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.73□□□□□ -2.29
UBBP0CG47 AC015712.3-201ENST00000559380 164 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 AC008752.3-201ENST00000588113 712 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 BNIP3P40-201ENST00000596017 556 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 AL020996.3-201ENST00000606617 222 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.73□□□□□ -2.29
UBBP0CG47 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.73□□□□□ -2.29
UBBP0CG47 AC104010.1-201ENST00000616889 150 ntBASIC0.73□□□□□ -2.29
UBBP0CG47 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBBP0CG47 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.72□□□□□ -2.29
UBBP0CG47 Y_RNA.22-201ENST00000362492 102 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 RNU6-968P-201ENST00000384076 107 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 RNU6-360P-201ENST00000390944 104 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 SNORD115.1-201ENST00000391109 76 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 RNA5SP201-201ENST00000410316 124 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 CYCSP33-201ENST00000414485 327 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.72□□□□□ -2.29
UBBP0CG47 RPL21P111-201ENST00000418453 477 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 AC013410.2-201ENST00000422627 201 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.72□□□□□ -2.29
UBBP0CG47 MTCYBP39-201ENST00000437562 491 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.72□□□□□ -2.29
UBBP0CG47 USP9YP25-201ENST00000457708 443 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.72□□□□□ -2.29
UBBP0CG47 SNORD116-28-201ENST00000516123 91 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 RN7SKP219-201ENST00000516825 296 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 AC011979.2-201ENST00000527568 352 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.72□□□□□ -2.29
UBBP0CG47 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.72□□□□□ -2.29
UBBP0CG47 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
UBBP0CG47 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 AC097478.2-201ENST00000610572 514 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 U6.42-201ENST00000618440 107 ntBASIC0.72□□□□□ -2.29
UBBP0CG47 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.72□□□□□ -2.29
UBBP0CG47 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
UBBP0CG47 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms