Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.11□□□□□ -2.23
TPM1P09493 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
TPM1P09493 VN1R80P-201ENST00000597126 338 ntBASIC1.11□□□□□ -2.23
TPM1P09493 AL590229.1-201ENST00000603497 542 ntBASIC1.11□□□□□ -2.23
TPM1P09493 AL158042.1-201ENST00000605338 460 ntBASIC1.11□□□□□ -2.23
TPM1P09493 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
TPM1P09493 AL139286.2-201ENST00000606838 396 ntBASIC1.11□□□□□ -2.23
TPM1P09493 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
TPM1P09493 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.11□□□□□ -2.23
TPM1P09493 RNU1-22P-201ENST00000363334 158 ntBASIC1.1□□□□□ -2.23
TPM1P09493 RNU6-1000P-201ENST00000391066 106 ntBASIC1.1□□□□□ -2.23
TPM1P09493 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.1□□□□□ -2.23
TPM1P09493 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.1□□□□□ -2.23
TPM1P09493 PGBD4P5-201ENST00000445958 426 ntBASIC1.1□□□□□ -2.23
TPM1P09493 snoU13.30-201ENST00000458951 104 ntBASIC1.1□□□□□ -2.23
TPM1P09493 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
TPM1P09493 AP000797.1-201ENST00000478870 387 ntBASIC1.1□□□□□ -2.23
TPM1P09493 AC022616.6-201ENST00000520479 119 ntBASIC1.1□□□□□ -2.23
TPM1P09493 MIR3118-1-201ENST00000581787 76 ntBASIC1.1□□□□□ -2.23
TPM1P09493 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.1□□□□□ -2.23
TPM1P09493 AC104073.3-201ENST00000610942 955 ntBASIC1.1□□□□□ -2.23
TPM1P09493 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TPM1P09493 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.1□□□□□ -2.23
TPM1P09493 AC013437.2-201ENST00000639587 677 ntBASIC1.1□□□□□ -2.23
TPM1P09493 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
TPM1P09493 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TPM1P09493 RNU6-527P-201ENST00000363425 104 ntBASIC1.09□□□□□ -2.23
TPM1P09493 SNORA63D-201ENST00000364359 132 ntBASIC1.09□□□□□ -2.23
TPM1P09493 RNU6-1019P-201ENST00000364424 107 ntBASIC1.09□□□□□ -2.23
TPM1P09493 RNU4-62P-201ENST00000410125 130 ntBASIC1.09□□□□□ -2.23
TPM1P09493 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.09□□□□□ -2.23
TPM1P09493 RPS6P15-201ENST00000431996 751 ntBASIC1.09□□□□□ -2.23
TPM1P09493 MTCYBP39-201ENST00000437562 491 ntBASIC1.09□□□□□ -2.23
TPM1P09493 AC114982.1-201ENST00000469402 321 ntBASIC1.09□□□□□ -2.23
TPM1P09493 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.09□□□□□ -2.23
TPM1P09493 AL163195.1-201ENST00000496941 348 ntBASIC1.09□□□□□ -2.23
TPM1P09493 AC104806.1-201ENST00000508720 308 ntBASIC1.09□□□□□ -2.23
TPM1P09493 AC108078.2-201ENST00000510750 236 ntBASIC1.09□□□□□ -2.23
TPM1P09493 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.09□□□□□ -2.23
TPM1P09493 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.09□□□□□ -2.23
TPM1P09493 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.09□□□□□ -2.23
TPM1P09493 AP002453.2-201ENST00000533503 320 ntBASIC1.09□□□□□ -2.23
TPM1P09493 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.09□□□□□ -2.23
TPM1P09493 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.09□□□□□ -2.23
TPM1P09493 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TPM1P09493 MZT1P2-201ENST00000604387 248 ntBASIC1.09□□□□□ -2.23
TPM1P09493 AC004492.1-201ENST00000607036 742 ntBASIC1.09□□□□□ -2.23
TPM1P09493 RNU6-371P-201ENST00000364283 108 ntBASIC1.08□□□□□ -2.24
TPM1P09493 RNU6-438P-201ENST00000365561 103 ntBASIC1.08□□□□□ -2.24
TPM1P09493 RNU6-142P-201ENST00000384019 107 ntBASIC1.08□□□□□ -2.24
TPM1P09493 SNORA29-201ENST00000384183 140 ntBASIC1.08□□□□□ -2.24
TPM1P09493 SNRPEP10-201ENST00000420249 274 ntBASIC1.08□□□□□ -2.24
TPM1P09493 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
TPM1P09493 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM1P09493 AC132479.1-201ENST00000449160 144 ntBASIC1.08□□□□□ -2.24
TPM1P09493 ATP5J2P3-201ENST00000451550 258 ntBASIC1.08□□□□□ -2.24
TPM1P09493 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM1P09493 HMGN2P9-201ENST00000476875 229 ntBASIC1.08□□□□□ -2.24
TPM1P09493 ATP5EP1-201ENST00000510257 156 ntBASIC1.08□□□□□ -2.24
TPM1P09493 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM1P09493 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM1P09493 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM1P09493 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM1P09493 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM1P09493 MIR5697-201ENST00000578045 78 ntBASIC1.08□□□□□ -2.24
TPM1P09493 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM1P09493 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.08□□□□□ -2.24
TPM1P09493 MIR3136-201ENST00000583498 78 ntBASIC1.08□□□□□ -2.24
TPM1P09493 RNU6-87P-201ENST00000607561 108 ntBASIC1.08□□□□□ -2.24
TPM1P09493 AC097478.2-201ENST00000610572 514 ntBASIC1.08□□□□□ -2.24
TPM1P09493 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.08□□□□□ -2.24
TPM1P09493 SNORD98-201ENST00000636377 67 ntBASIC1.08□□□□□ -2.24
TPM1P09493 SNORD56.2-201ENST00000363242 71 ntBASIC1.07□□□□□ -2.24
TPM1P09493 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
TPM1P09493 RNU6-968P-201ENST00000384076 107 ntBASIC1.07□□□□□ -2.24
TPM1P09493 MIR194-1-201ENST00000384892 85 ntBASIC1.07□□□□□ -2.24
TPM1P09493 RNU6-1176P-201ENST00000390955 107 ntBASIC1.07□□□□□ -2.24
TPM1P09493 EEF1A1P40-201ENST00000412883 573 ntBASIC1.07□□□□□ -2.24
TPM1P09493 RPL21P90-201ENST00000415692 466 ntBASIC1.07□□□□□ -2.24
TPM1P09493 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.07□□□□□ -2.24
TPM1P09493 RPL39P28-201ENST00000465655 155 ntBASIC1.07□□□□□ -2.24
TPM1P09493 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.07□□□□□ -2.24
TPM1P09493 SNORD116-28-201ENST00000516123 91 ntBASIC1.07□□□□□ -2.24
TPM1P09493 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.07□□□□□ -2.24
TPM1P09493 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.07□□□□□ -2.24
TPM1P09493 AC013244.3-201ENST00000605614 388 ntBASIC1.07□□□□□ -2.24
TPM1P09493 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.07□□□□□ -2.24
TPM1P09493 AC083806.3-201ENST00000614016 455 ntBASIC1.07□□□□□ -2.24
TPM1P09493 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
TPM1P09493 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TPM1P09493 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
TPM1P09493 RNU6-862P-201ENST00000362804 105 ntBASIC1.06□□□□□ -2.24
TPM1P09493 RNU4-92P-201ENST00000363783 136 ntBASIC1.06□□□□□ -2.24
TPM1P09493 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
TPM1P09493 SNORA32.2-201ENST00000384049 122 ntBASIC1.06□□□□□ -2.24
TPM1P09493 AC114491.1-201ENST00000416095 246 ntBASIC1.06□□□□□ -2.24
TPM1P09493 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
TPM1P09493 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.06□□□□□ -2.24
TPM1P09493 MTCO3P28-201ENST00000513351 515 ntBASIC1.06□□□□□ -2.24
TPM1P09493 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms