Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AL591043.1-201ENST00000432461 424 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 IFNA20P-201ENST00000436840 528 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 PRPS1P1-201ENST00000445305 876 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 YWHAEP4-201ENST00000505390 198 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 RNA5SP182-201ENST00000516064 82 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 RN7SKP219-201ENST00000516825 296 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 SNORA25.17-201ENST00000517184 124 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AK6P1-201ENST00000540219 478 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC023050.3-201ENST00000541142 333 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AGGF1P4-201ENST00000568249 801 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AL391840.1-201ENST00000571144 367 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 MIR4529-201ENST00000578110 78 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 MTATP6P3-201ENST00000581686 676 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AL670379.2-201ENST00000604983 252 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC002044.1-201ENST00000606707 158 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC063943.3-201ENST00000615562 356 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC008147.4-201ENST00000617570 1204 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC022079.1-201ENST00000621546 602 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 AC007792.1-201ENST00000623023 402 ntBASIC1.53□□□□□ -2.16
HLA-DPB1P04440 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC092881.1-201ENST00000638218 2733 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 SNORD115-3-201ENST00000363100 82 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 RNU6-336P-201ENST00000364891 107 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 RNU6-546P-201ENST00000383991 107 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 RNU6-692P-201ENST00000384496 107 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 MTATP6P18-201ENST00000417994 673 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC090960.1-201ENST00000421072 306 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 RPS15AP10-201ENST00000432472 382 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AL645568.3-201ENST00000433683 316 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC243964.1-201ENST00000441814 261 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 MTCO1P19-201ENST00000443487 500 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AL137159.1-201ENST00000452808 512 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC022364.2-201ENST00000457963 554 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 RNU6-956P-201ENST00000458868 103 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 SCARNA18-201ENST00000459004 134 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC009646.1-201ENST00000510455 318 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 RN7SKP256-201ENST00000517201 314 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC109347.2-201ENST00000610220 349 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 MIR6845-201ENST00000613182 61 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC091834.1-201ENST00000614543 472 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 SDR42E1P4-201ENST00000620894 481 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AC005858.4-201ENST00000623191 700 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 MIR3974-201ENST00000637126 96 ntBASIC1.52□□□□□ -2.17
HLA-DPB1P04440 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HLA-DPB1P04440 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 ZNF702P-202ENST00000434269 1966 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 RNU6-552P-201ENST00000362869 119 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 RNU6-1159P-201ENST00000362933 107 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 Y_RNA.381-201ENST00000365666 102 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 RNU6-903P-201ENST00000391270 109 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 MIR1294-201ENST00000408503 142 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 MIR1283-2-201ENST00000408621 87 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 USP9YP18-201ENST00000425912 695 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 FDX1P2-201ENST00000450769 375 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 PRELID3BP1-201ENST00000457142 540 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC104564.1-201ENST00000493028 407 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC116337.1-201ENST00000509680 687 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 RNU5F-2P-201ENST00000516066 82 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 RNU6-295P-201ENST00000516901 104 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC022616.8-201ENST00000533569 253 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC110760.3-201ENST00000598794 467 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC068790.2-201ENST00000602601 557 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 SNRPGP17-201ENST00000603780 214 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AL391646.1-201ENST00000603860 190 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC008536.2-201ENST00000607284 349 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AP001596.2-201ENST00000608410 312 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 MIR8081-201ENST00000611533 95 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC084768.2-201ENST00000622736 221 ntBASIC1.51□□□□□ -2.17
HLA-DPB1P04440 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DPB1P04440 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms