Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.49□□□□□ -2.17
CD74P04233 AC104136.1-201ENST00000512969 394 ntBASIC1.49□□□□□ -2.17
CD74P04233 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-430P-201ENST00000517078 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-586P-201ENST00000517265 104 ntBASIC1.49□□□□□ -2.17
CD74P04233 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.49□□□□□ -2.17
CD74P04233 AP003072.2-201ENST00000527756 676 ntBASIC1.49□□□□□ -2.17
CD74P04233 CBX3P4-201ENST00000538909 354 ntBASIC1.49□□□□□ -2.17
CD74P04233 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.49□□□□□ -2.17
CD74P04233 AL391840.1-201ENST00000571144 367 ntBASIC1.49□□□□□ -2.17
CD74P04233 MIR4703-201ENST00000577728 79 ntBASIC1.49□□□□□ -2.17
CD74P04233 MIR3198-2-201ENST00000577868 80 ntBASIC1.49□□□□□ -2.17
CD74P04233 MIR4713-201ENST00000582691 75 ntBASIC1.49□□□□□ -2.17
CD74P04233 MIR4769-201ENST00000584126 77 ntBASIC1.49□□□□□ -2.17
CD74P04233 AL078605.1-201ENST00000603529 500 ntBASIC1.49□□□□□ -2.17
CD74P04233 AC025449.1-201ENST00000603896 529 ntBASIC1.49□□□□□ -2.17
CD74P04233 AL670379.2-201ENST00000604983 252 ntBASIC1.49□□□□□ -2.17
CD74P04233 AC087752.4-201ENST00000605911 462 ntBASIC1.49□□□□□ -2.17
CD74P04233 RNU6-6P-201ENST00000606623 107 ntBASIC1.49□□□□□ -2.17
CD74P04233 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.49□□□□□ -2.17
CD74P04233 AC008147.4-201ENST00000617570 1204 ntBASIC1.49□□□□□ -2.17
CD74P04233 AC009161.2-201ENST00000624626 138 ntBASIC1.49□□□□□ -2.17
CD74P04233 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CD74P04233 HAUS6P2-201ENST00000433254 2404 ntBASIC1.49□□□□□ -2.17
CD74P04233 AC002543.1-201ENST00000299783 1954 ntBASIC1.48□□□□□ -2.17
CD74P04233 RNU6-655P-201ENST00000362858 107 ntBASIC1.48□□□□□ -2.17
CD74P04233 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
CD74P04233 Y_RNA.324-201ENST00000365165 102 ntBASIC1.48□□□□□ -2.17
CD74P04233 RNA5SP465-201ENST00000391195 109 ntBASIC1.48□□□□□ -2.17
CD74P04233 MIR934-201ENST00000401241 83 ntBASIC1.48□□□□□ -2.17
CD74P04233 OR9R1P-201ENST00000412200 877 ntBASIC1.48□□□□□ -2.17
CD74P04233 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.48□□□□□ -2.17
CD74P04233 VN1R36P-201ENST00000414936 291 ntBASIC1.48□□□□□ -2.17
CD74P04233 EIF4EP2-201ENST00000422816 654 ntBASIC1.48□□□□□ -2.17
CD74P04233 AL669831.1-202ENST00000428504 417 ntBASIC1.48□□□□□ -2.17
CD74P04233 MTCO2P11-201ENST00000431069 680 ntBASIC1.48□□□□□ -2.17
CD74P04233 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.48□□□□□ -2.17
CD74P04233 GTF2IP13-201ENST00000438487 386 ntBASIC1.48□□□□□ -2.17
CD74P04233 AC022364.2-201ENST00000457963 554 ntBASIC1.48□□□□□ -2.17
CD74P04233 ARL2BPP4-201ENST00000506854 471 ntBASIC1.48□□□□□ -2.17
CD74P04233 MTCO3P7-201ENST00000510008 774 ntBASIC1.48□□□□□ -2.17
CD74P04233 AC010486.3-201ENST00000511602 785 ntBASIC1.48□□□□□ -2.17
CD74P04233 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
CD74P04233 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.48□□□□□ -2.17
CD74P04233 AC104581.2-201ENST00000572227 430 ntBASIC1.48□□□□□ -2.17
CD74P04233 RMST_4.1-201ENST00000616886 107 ntBASIC1.48□□□□□ -2.17
CD74P04233 AC136475.10-201ENST00000620253 385 ntBASIC1.48□□□□□ -2.17
CD74P04233 AC022079.1-201ENST00000621546 602 ntBASIC1.48□□□□□ -2.17
CD74P04233 RMST_7.1-201ENST00000621935 268 ntBASIC1.48□□□□□ -2.17
CD74P04233 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CD74P04233 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.48□□□□□ -2.17
CD74P04233 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CD74P04233 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CD74P04233 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.47□□□□□ -2.17
CD74P04233 snoU2_19.1-201ENST00000362361 80 ntBASIC1.47□□□□□ -2.17
CD74P04233 RNU6-487P-201ENST00000365430 104 ntBASIC1.47□□□□□ -2.17
CD74P04233 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CD74P04233 SNORD70.1-201ENST00000391007 85 ntBASIC1.47□□□□□ -2.17
CD74P04233 RNU2-23P-201ENST00000410545 195 ntBASIC1.47□□□□□ -2.17
CD74P04233 RNU4-46P-201ENST00000410818 138 ntBASIC1.47□□□□□ -2.17
CD74P04233 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.47□□□□□ -2.17
CD74P04233 AL591043.1-201ENST00000432461 424 ntBASIC1.47□□□□□ -2.17
CD74P04233 MTCO1P19-201ENST00000443487 500 ntBASIC1.47□□□□□ -2.17
CD74P04233 AC132479.1-201ENST00000449160 144 ntBASIC1.47□□□□□ -2.17
CD74P04233 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.47□□□□□ -2.17
CD74P04233 SNRPGP7-201ENST00000469016 106 ntBASIC1.47□□□□□ -2.17
CD74P04233 AL121594.1-201ENST00000475906 575 ntBASIC1.47□□□□□ -2.17
CD74P04233 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.47□□□□□ -2.17
CD74P04233 MTCYBP40-201ENST00000509390 1135 ntBASIC1.47□□□□□ -2.17
CD74P04233 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.47□□□□□ -2.17
CD74P04233 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.47□□□□□ -2.17
CD74P04233 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.47□□□□□ -2.17
CD74P04233 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.47□□□□□ -2.17
CD74P04233 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.47□□□□□ -2.17
CD74P04233 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.47□□□□□ -2.17
CD74P04233 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.47□□□□□ -2.17
CD74P04233 AC233702.2-202ENST00000562547 291 ntBASIC1.47□□□□□ -2.17
CD74P04233 ELOCP5-201ENST00000604924 333 ntBASIC1.47□□□□□ -2.17
CD74P04233 AC004908.3-201ENST00000610248 625 ntBASIC1.47□□□□□ -2.17
CD74P04233 U1.36-201ENST00000620684 176 ntBASIC1.47□□□□□ -2.17
CD74P04233 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CD74P04233 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
CD74P04233 ZNF680P1-201ENST00000436625 1469 ntBASIC1.46□□□□□ -2.18
CD74P04233 SNORD115-3-201ENST00000363100 82 ntBASIC1.46□□□□□ -2.18
CD74P04233 SNORA75-201ENST00000384158 137 ntBASIC1.46□□□□□ -2.18
CD74P04233 RNU6-393P-201ENST00000384475 107 ntBASIC1.46□□□□□ -2.18
CD74P04233 RNU6-1274P-201ENST00000384557 107 ntBASIC1.46□□□□□ -2.18
CD74P04233 RNY3P9-201ENST00000384727 106 ntBASIC1.46□□□□□ -2.18
CD74P04233 MIR544A-201ENST00000384855 91 ntBASIC1.46□□□□□ -2.18
CD74P04233 MIR764-201ENST00000390811 85 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC068050.1-201ENST00000394891 380 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC019129.1-201ENST00000403786 261 ntBASIC1.46□□□□□ -2.18
CD74P04233 RNA5SP390-201ENST00000410191 113 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.46□□□□□ -2.18
CD74P04233 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.46□□□□□ -2.18
CD74P04233 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.46□□□□□ -2.18
CD74P04233 AL591806.2-201ENST00000433122 173 ntBASIC1.46□□□□□ -2.18
CD74P04233 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.46□□□□□ -2.18
CD74P04233 RPL39P29-201ENST00000447779 157 ntBASIC1.46□□□□□ -2.18
CD74P04233 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms