Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR6891-201ENST00000618788 93 ntBASIC4.08□□□□□ -1.76
PDGFAP04085 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
PDGFAP04085 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFAP04085 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFAP04085 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFAP04085 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
PDGFAP04085 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PDGFAP04085 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFAP04085 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.07□□□□□ -1.76
PDGFAP04085 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFAP04085 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFAP04085 Y_RNA.40-201ENST00000362645 93 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 RNU6-1272P-201ENST00000362776 107 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 U3.9-201ENST00000363823 204 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 Y_RNA.415-201ENST00000384012 112 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 MIR670-201ENST00000390142 98 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFAP04085 RNA5SP38-201ENST00000410750 119 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 AL117339.2-201ENST00000430475 180 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.07□□□□□ -1.76
PDGFAP04085 AC140059.1-201ENST00000489238 361 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFAP04085 RNU6-1219P-201ENST00000516143 112 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 RNU6-344P-201ENST00000516635 111 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFAP04085 AP002001.1-203ENST00000534002 267 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 MIR3144-201ENST00000579460 79 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 SNORD11B-201ENST00000607707 90 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 MIR6867-201ENST00000610636 67 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 TCL6_2.1-201ENST00000615162 119 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 AC018692.3-201ENST00000623929 123 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFAP04085 AC010680.1-201ENST00000590024 3590 ntBASIC4.07□□□□□ -1.76
PDGFAP04085 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PDGFAP04085 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PDGFAP04085 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFAP04085 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFAP04085 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFAP04085 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PDGFAP04085 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
PDGFAP04085 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFAP04085 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFAP04085 MIR613-201ENST00000385248 95 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AL357139.1-201ENST00000407792 426 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AL356095.1-201ENST00000417217 199 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AIMP1P2-201ENST00000425294 312 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 BTF3P11-201ENST00000426582 477 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 SNORA71B-202ENST00000439232 272 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 snoU13.22-201ENST00000459428 104 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 RN7SL691P-201ENST00000494487 301 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AL592156.1-201ENST00000508758 304 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFAP04085 AC006499.6-201ENST00000511169 607 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 RNU7-200P-201ENST00000516105 62 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 RNU1-45P-201ENST00000517191 141 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFAP04085 TGIF1P1-201ENST00000558095 802 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AL391813.1-201ENST00000603098 260 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AL137843.1-201ENST00000605078 385 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 MIR8059-201ENST00000620427 81 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AC006111.3-201ENST00000622137 383 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 AC140479.6-201ENST00000633535 357 ntBASIC4.06□□□□□ -1.76
PDGFAP04085 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFAP04085 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFAP04085 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PDGFAP04085 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.06□□□□□ -1.76
PDGFAP04085 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFAP04085 MAPK10-253ENST00000641010 4072 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 AC015813.6-201ENST00000624409 5808 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFAP04085 RNU6-655P-201ENST00000362858 107 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 RNU6-1210P-201ENST00000363775 107 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 RNA5SP240-201ENST00000365355 128 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFAP04085 RNU6-804P-201ENST00000384286 107 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 RNU6-394P-201ENST00000410735 107 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 AL606753.1-201ENST00000427435 87 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 AC027124.2-201ENST00000428249 105 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 RN7SL132P-201ENST00000478131 296 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 RPS26P15-201ENST00000488067 348 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFAP04085 RNU2-12P-201ENST00000517216 168 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFAP04085 AC009127.3-201ENST00000570531 403 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 MIR4444-1-201ENST00000581696 74 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 MIR4444-2-201ENST00000584390 74 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 AC104465.1-201ENST00000611365 139 ntBASIC4.05□□□□□ -1.76
PDGFAP04085 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFAP04085 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFAP04085 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFAP04085 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFAP04085 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PDGFAP04085 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFAP04085 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFAP04085 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PDGFAP04085 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFAP04085 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFAP04085 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFAP04085 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDGFAP04085 Y_RNA.8-201ENST00000362353 102 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 673.1 ms