Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CBX3P7-201ENST00000532876 502 ntBASIC2.16□□□□□ -2.06
MT-ND1P03886 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.16□□□□□ -2.06
MT-ND1P03886 MIR3941-201ENST00000582572 103 ntBASIC2.16□□□□□ -2.06
MT-ND1P03886 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
MT-ND1P03886 AL357078.3-201ENST00000607528 618 ntBASIC2.16□□□□□ -2.06
MT-ND1P03886 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.16□□□□□ -2.06
MT-ND1P03886 DUXAP9-208ENST00000622815 614 ntBASIC2.16□□□□□ -2.06
MT-ND1P03886 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MT-ND1P03886 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
MT-ND1P03886 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
MT-ND1P03886 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
MT-ND1P03886 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
MT-ND1P03886 RNU6-428P-201ENST00000362942 107 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.15□□□□□ -2.07
MT-ND1P03886 FGF7P8-201ENST00000402994 292 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AL356776.1-201ENST00000406574 447 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 RAP1BP3-201ENST00000407180 549 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AL139413.1-201ENST00000421309 217 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.15□□□□□ -2.07
MT-ND1P03886 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.15□□□□□ -2.07
MT-ND1P03886 AC108938.1-201ENST00000451204 136 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 RPS3P1-201ENST00000456781 192 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AC007547.1-201ENST00000462177 490 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AC116353.2-201ENST00000505332 712 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.15□□□□□ -2.07
MT-ND1P03886 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 RNA5SP82-201ENST00000516707 92 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 RNU6-323P-201ENST00000521915 107 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 CR383656.8-201ENST00000549046 145 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AC027176.1-201ENST00000560204 514 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 MYL12BP1-201ENST00000569826 507 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AC018638.8-201ENST00000588755 281 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 RBM11P1-201ENST00000604951 799 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AC096772.1-201ENST00000609146 564 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AL161423.1-201ENST00000613700 262 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 MIR6817-201ENST00000615588 66 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.15□□□□□ -2.07
MT-ND1P03886 AC012640.5-201ENST00000623897 319 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 SCARNA4-202ENST00000625402 129 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 U4.7-201ENST00000638126 106 ntBASIC2.15□□□□□ -2.07
MT-ND1P03886 RNU6-858P-201ENST00000362436 107 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 Y_RNA.303-201ENST00000364998 94 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 SNORA32.2-201ENST00000384049 122 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 SNORD116-20-201ENST00000384529 92 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 SNORA11.1-201ENST00000408133 129 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.14□□□□□ -2.07
MT-ND1P03886 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.14□□□□□ -2.07
MT-ND1P03886 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.14□□□□□ -2.07
MT-ND1P03886 RPL23AP83-201ENST00000434984 473 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 NDUFA5P4-201ENST00000436704 385 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.14□□□□□ -2.07
MT-ND1P03886 AL031659.1-201ENST00000447075 539 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.14□□□□□ -2.07
MT-ND1P03886 RNU7-138P-201ENST00000459479 64 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AP001025.1-201ENST00000486139 332 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC068781.1-201ENST00000488231 618 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.14□□□□□ -2.07
MT-ND1P03886 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.14□□□□□ -2.07
MT-ND1P03886 RNA5SP148-201ENST00000516527 94 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 SNORA31.23-201ENST00000517219 133 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC118273.2-201ENST00000532092 465 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AP000763.2-201ENST00000540641 163 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.14□□□□□ -2.07
MT-ND1P03886 AC025423.5-201ENST00000550230 219 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 RPS3AP23-202ENST00000574601 686 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.14□□□□□ -2.07
MT-ND1P03886 MIR3672-201ENST00000584290 82 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MT-ND1P03886 MIR3942-201ENST00000585264 109 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.14□□□□□ -2.07
MT-ND1P03886 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 BNIP3P10-201ENST00000605360 577 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC103810.6-201ENST00000606708 136 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC064836.2-201ENST00000609491 462 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MT-ND1P03886 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 AC009233.1-201ENST00000616477 371 ntBASIC2.14□□□□□ -2.07
MT-ND1P03886 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MT-ND1P03886 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.14□□□□□ -2.07
MT-ND1P03886 RNU5E-7P-201ENST00000365290 117 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 RNU1-148P-201ENST00000384472 162 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 Y_RNA.530-201ENST00000384587 101 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 MIR483-201ENST00000385070 76 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 RNU6-876P-201ENST00000391295 104 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 MIR450B-201ENST00000401182 78 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 RNU6-1140P-201ENST00000410517 106 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.13□□□□□ -2.07
MT-ND1P03886 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.13□□□□□ -2.07
MT-ND1P03886 AL117339.3-201ENST00000418733 162 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 MTCO3P18-201ENST00000440206 761 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.13□□□□□ -2.07
MT-ND1P03886 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
MT-ND1P03886 AC013470.1-201ENST00000453438 462 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 AC090515.1-201ENST00000465295 476 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 RPL31P58-201ENST00000469001 379 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.13□□□□□ -2.07
MT-ND1P03886 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.13□□□□□ -2.07
MT-ND1P03886 AC092436.3-201ENST00000511788 257 ntBASIC2.13□□□□□ -2.07
MT-ND1P03886 RNU6-1332P-201ENST00000516666 104 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms