Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 BX682237.1-201ENST00000415016 335 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.52□□□□□ -2.01
COL2A1P02458 AL139396.1-201ENST00000421137 167 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 SNORD121B-201ENST00000458838 81 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC087884.1-201ENST00000469738 328 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.52□□□□□ -2.01
COL2A1P02458 AC022447.4-201ENST00000504053 364 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC097473.1-201ENST00000508142 408 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-123P-201ENST00000516163 102 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC087854.1-201ENST00000519706 414 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 DEFB108D-201ENST00000527787 222 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.52□□□□□ -2.01
COL2A1P02458 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.52□□□□□ -2.01
COL2A1P02458 MIR4293-201ENST00000584305 78 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC008521.1-201ENST00000587471 187 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC104695.3-201ENST00000604052 296 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 PISRT1.1-201ENST00000616930 107 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.52□□□□□ -2.01
COL2A1P02458 AL139811.1-201ENST00000424779 2299 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 ZNF519P1-201ENST00000449011 1626 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.52□□□□□ -2.01
COL2A1P02458 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.52□□□□□ -2.01
COL2A1P02458 ZNF734P-201ENST00000419494 1534 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.52□□□□□ -2.01
COL2A1P02458 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.52□□□□□ -2.01
COL2A1P02458 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL2A1P02458 AL139276.1-201ENST00000311910 1001 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC138393.1-203ENST00000327086 343 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 Y_RNA.176-201ENST00000363815 109 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-1032P-201ENST00000384100 107 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-1127P-201ENST00000384580 107 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 MIR124-3-201ENST00000384866 87 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 Y_RNA.645-201ENST00000391229 102 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 MIR548F4-201ENST00000408515 105 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-1050P-201ENST00000410388 107 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AL139156.1-201ENST00000412785 841 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.52□□□□□ -2.01
COL2A1P02458 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.52□□□□□ -2.01
COL2A1P02458 RPL23AP50-201ENST00000434149 455 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.52□□□□□ -2.01
COL2A1P02458 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.52□□□□□ -2.01
COL2A1P02458 AP000873.1-201ENST00000463987 400 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.52□□□□□ -2.01
COL2A1P02458 AC008526.1-201ENST00000509149 338 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.52□□□□□ -2.01
COL2A1P02458 SNORA25.10-201ENST00000515926 124 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-189P-201ENST00000516120 101 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-390P-201ENST00000516259 103 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNA5SP384-201ENST00000516615 116 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 RNU6-826P-201ENST00000516827 104 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL2A1P02458 OR5D17P-201ENST00000531492 978 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 GNAI2P1-201ENST00000541815 315 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 IMMP1LP2-201ENST00000552954 492 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AL161670.1-201ENST00000554348 137 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.52□□□□□ -2.01
COL2A1P02458 AC004817.2-201ENST00000561794 651 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC011890.2-201ENST00000613393 294 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.52□□□□□ -2.01
COL2A1P02458 AL138726.1-201ENST00000614873 333 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 AC022418.1-201ENST00000624118 445 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 Z69720.2-201ENST00000624755 279 ntBASIC2.52□□□□□ -2.01
COL2A1P02458 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL2A1P02458 AF127577.6-201ENST00000623352 2191 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.51□□□□□ -2.01
COL2A1P02458 Y_RNA.2-201ENST00000362330 96 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 Y_RNA.48-201ENST00000362710 103 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 Y_RNA.149-201ENST00000363558 117 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 Y_RNA.153-201ENST00000363615 91 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 RNU6-702P-201ENST00000364982 107 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 SMIM11P1-201ENST00000369586 178 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 Y_RNA.389-201ENST00000383924 113 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 RNU6-1040P-201ENST00000383974 107 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 MIR7-2-201ENST00000384970 110 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 U3.29-201ENST00000391296 212 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 EIF4E2P1-201ENST00000393781 255 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 AC092809.3-201ENST00000415453 231 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 CYCSP49-201ENST00000420810 319 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.51□□□□□ -2.01
COL2A1P02458 AC018865.2-201ENST00000423631 129 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 RPL30P3-201ENST00000424262 333 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 HIGD1AP11-201ENST00000438361 280 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.51□□□□□ -2.01
COL2A1P02458 AL731563.1-201ENST00000442202 214 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 MTND1P17-201ENST00000448961 204 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.51□□□□□ -2.01
COL2A1P02458 SUMO1P2-201ENST00000452524 304 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 DYNLL1P5-201ENST00000467158 270 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 AC117503.1-201ENST00000472241 394 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 AC092451.1-201ENST00000480211 153 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 RPL23AP55-201ENST00000498163 452 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 Y_RNA.689-201ENST00000516589 107 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.51□□□□□ -2.01
COL2A1P02458 MTCO3P23-201ENST00000561363 289 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.51□□□□□ -2.01
COL2A1P02458 MIR5692C1-201ENST00000585309 91 ntBASIC2.51□□□□□ -2.01
COL2A1P02458 AC011494.1-201ENST00000596454 237 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms