Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 TOMM20P4-201ENST00000427861 435 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 RPS15AP10-201ENST00000432472 382 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 RPL7P54-201ENST00000438336 674 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AL122001.1-201ENST00000457027 370 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC006512.1-201ENST00000468816 291 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 HMGB1P35-201ENST00000503360 598 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 RNU5F-2P-201ENST00000516066 82 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 Y_RNA.695-201ENST00000516715 107 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AGGF1P4-201ENST00000568249 801 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AL391840.1-201ENST00000571144 367 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 SNRPGP17-201ENST00000603780 214 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC087241.4-201ENST00000612441 480 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC091834.1-201ENST00000614543 472 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC078883.4-201ENST00000623218 367 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC097372.5-201ENST00000623665 376 ntBASIC1.41□□□□□ -2.18
HLA-DQB1P01920 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DQB1P01920 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HLA-DQB1P01920 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
HLA-DQB1P01920 snoU2_19.1-201ENST00000362361 80 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNU6-1120P-201ENST00000362988 108 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNU6-546P-201ENST00000383991 107 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNU6-611P-201ENST00000384276 104 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNU6-434P-201ENST00000384376 107 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNU6-1222P-201ENST00000384615 107 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 MIR544A-201ENST00000384855 91 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC068050.1-201ENST00000394891 380 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 MIR1283-2-201ENST00000408621 87 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNU2-9P-201ENST00000410194 145 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNU2-29P-201ENST00000410423 189 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 MTATP6P18-201ENST00000417994 673 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC090960.1-201ENST00000421072 306 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 PRPS1P1-201ENST00000445305 876 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AL137159.1-201ENST00000452808 512 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 SCARNA18-201ENST00000459004 134 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC079382.1-201ENST00000493346 557 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC105417.1-201ENST00000514691 285 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 COPS8P3-201ENST00000526024 482 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC022616.8-201ENST00000533569 253 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AL356057.1-201ENST00000533798 831 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC022880.1-201ENST00000534017 973 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC008752.3-201ENST00000588113 712 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC110760.3-201ENST00000598794 467 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC068790.2-201ENST00000602601 557 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AL391646.1-201ENST00000603860 190 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC104073.3-201ENST00000610942 955 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 AC090517.3-201ENST00000625170 141 ntBASIC1.4□□□□□ -2.19
HLA-DQB1P01920 RNA5SP276-201ENST00000362580 94 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 RNU6-552P-201ENST00000362869 119 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 RNU6-428P-201ENST00000362942 107 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 Y_RNA.399-201ENST00000383955 105 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 MIR29B2-201ENST00000385055 81 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 RPS29P13-201ENST00000402041 169 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQB1P01920 CETN4P-201ENST00000432407 469 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AL591043.1-201ENST00000432461 424 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 DNAJC19P4-201ENST00000440115 345 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 PRELID3BP1-201ENST00000457142 540 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQB1P01920 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AC009646.1-201ENST00000510455 318 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AC010486.1-201ENST00000511793 424 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AC026407.1-201ENST00000518369 204 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQB1P01920 MIR5583-1-201ENST00000580941 59 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 MTATP6P3-201ENST00000581686 676 ntBASIC1.39□□□□□ -2.19
HLA-DQB1P01920 AC018889.1-201ENST00000605372 397 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms