Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
TGFAP01135 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
TGFAP01135 AC016717.2-201ENST00000609089 5141 ntBASIC1.89□□□□□ -2.11
TGFAP01135 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TGFAP01135 RNU6-43P-201ENST00000384302 107 ntBASIC1.89□□□□□ -2.11
TGFAP01135 RNU6-517P-201ENST00000384362 110 ntBASIC1.89□□□□□ -2.11
TGFAP01135 RN7SKP32-201ENST00000410167 303 ntBASIC1.89□□□□□ -2.11
TGFAP01135 RN7SKP61-201ENST00000410642 295 ntBASIC1.89□□□□□ -2.11
TGFAP01135 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.89□□□□□ -2.11
TGFAP01135 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TGFAP01135 AL117339.3-201ENST00000418733 162 ntBASIC1.89□□□□□ -2.11
TGFAP01135 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.89□□□□□ -2.11
TGFAP01135 AC078809.1-201ENST00000427601 140 ntBASIC1.89□□□□□ -2.11
TGFAP01135 AL451074.3-201ENST00000437709 472 ntBASIC1.89□□□□□ -2.11
TGFAP01135 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.89□□□□□ -2.11
TGFAP01135 RPL23AP42-201ENST00000471152 471 ntBASIC1.89□□□□□ -2.11
TGFAP01135 ARL2BPP4-201ENST00000506854 471 ntBASIC1.89□□□□□ -2.11
TGFAP01135 AC010493.1-201ENST00000513479 292 ntBASIC1.89□□□□□ -2.11
TGFAP01135 AL137161.1-201ENST00000532231 390 ntBASIC1.89□□□□□ -2.11
TGFAP01135 AC022880.1-201ENST00000534017 973 ntBASIC1.89□□□□□ -2.11
TGFAP01135 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.89□□□□□ -2.11
TGFAP01135 AC008088.1-201ENST00000580993 280 ntBASIC1.89□□□□□ -2.11
TGFAP01135 AC025449.1-201ENST00000603896 529 ntBASIC1.89□□□□□ -2.11
TGFAP01135 AC008536.2-201ENST00000607284 349 ntBASIC1.89□□□□□ -2.11
TGFAP01135 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TGFAP01135 AC008147.4-201ENST00000617570 1204 ntBASIC1.89□□□□□ -2.11
TGFAP01135 MIR1248-201ENST00000629190 106 ntBASIC1.89□□□□□ -2.11
TGFAP01135 ZNF680P1-201ENST00000436625 1469 ntBASIC1.88□□□□□ -2.11
TGFAP01135 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
TGFAP01135 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TGFAP01135 RNU6-743P-201ENST00000364151 106 ntBASIC1.88□□□□□ -2.11
TGFAP01135 RNU6-266P-201ENST00000364225 107 ntBASIC1.88□□□□□ -2.11
TGFAP01135 SNORD32B-201ENST00000364460 84 ntBASIC1.88□□□□□ -2.11
TGFAP01135 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
TGFAP01135 SNORA11.4-201ENST00000408823 129 ntBASIC1.88□□□□□ -2.11
TGFAP01135 RNU2-9P-201ENST00000410194 145 ntBASIC1.88□□□□□ -2.11
TGFAP01135 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.88□□□□□ -2.11
TGFAP01135 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.88□□□□□ -2.11
TGFAP01135 RPS15AP28-201ENST00000435088 386 ntBASIC1.88□□□□□ -2.11
TGFAP01135 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.88□□□□□ -2.11
TGFAP01135 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.88□□□□□ -2.11
TGFAP01135 RPS27AP8-201ENST00000452665 445 ntBASIC1.88□□□□□ -2.11
TGFAP01135 AC090255.1-201ENST00000495779 349 ntBASIC1.88□□□□□ -2.11
TGFAP01135 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.88□□□□□ -2.11
TGFAP01135 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
TGFAP01135 RN7SKP219-201ENST00000516825 296 ntBASIC1.88□□□□□ -2.11
TGFAP01135 HSPE1P18-201ENST00000517602 280 ntBASIC1.88□□□□□ -2.11
TGFAP01135 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.88□□□□□ -2.11
TGFAP01135 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
TGFAP01135 MIR4713-201ENST00000582691 75 ntBASIC1.88□□□□□ -2.11
TGFAP01135 MIR5007-201ENST00000583098 95 ntBASIC1.88□□□□□ -2.11
TGFAP01135 AC123912.5-201ENST00000605470 343 ntBASIC1.88□□□□□ -2.11
TGFAP01135 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.88□□□□□ -2.11
TGFAP01135 AC073114.1-201ENST00000612027 490 ntBASIC1.88□□□□□ -2.11
TGFAP01135 RNU4-15P-201ENST00000362613 141 ntBASIC1.87□□□□□ -2.11
TGFAP01135 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
TGFAP01135 RNU6-692P-201ENST00000384496 107 ntBASIC1.87□□□□□ -2.11
TGFAP01135 RNU6-160P-201ENST00000384591 107 ntBASIC1.87□□□□□ -2.11
TGFAP01135 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
TGFAP01135 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
TGFAP01135 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TGFAP01135 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.87□□□□□ -2.11
TGFAP01135 AC010975.2-201ENST00000427781 588 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC244670.1-201ENST00000436879 112 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.87□□□□□ -2.11
TGFAP01135 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.87□□□□□ -2.11
TGFAP01135 AL031667.1-201ENST00000440222 725 ntBASIC1.87□□□□□ -2.11
TGFAP01135 BET1P1-201ENST00000482276 359 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC079804.2-201ENST00000490376 200 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC145146.1-201ENST00000496370 254 ntBASIC1.87□□□□□ -2.11
TGFAP01135 RPS27P27-201ENST00000498779 255 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC107222.1-201ENST00000510899 637 ntBASIC1.87□□□□□ -2.11
TGFAP01135 Y_RNA.695-201ENST00000516715 107 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.87□□□□□ -2.11
TGFAP01135 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.87□□□□□ -2.11
TGFAP01135 AC009314.1-201ENST00000603871 304 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC107304.1-201ENST00000604229 296 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC002044.1-201ENST00000606707 158 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC067747.1-201ENST00000608026 250 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AC104073.3-201ENST00000610942 955 ntBASIC1.87□□□□□ -2.11
TGFAP01135 AL158063.1-201ENST00000615349 536 ntBASIC1.87□□□□□ -2.11
TGFAP01135 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TGFAP01135 AC241585.2-209ENST00000638217 143 ntBASIC1.87□□□□□ -2.11
TGFAP01135 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TGFAP01135 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.87□□□□□ -2.11
TGFAP01135 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TGFAP01135 AC092268.1-201ENST00000342691 405 ntBASIC1.86□□□□□ -2.11
TGFAP01135 RNU6-428P-201ENST00000362942 107 ntBASIC1.86□□□□□ -2.11
TGFAP01135 RNU5A-6P-201ENST00000384136 116 ntBASIC1.86□□□□□ -2.11
TGFAP01135 MIR764-201ENST00000390811 85 ntBASIC1.86□□□□□ -2.11
TGFAP01135 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.86□□□□□ -2.11
TGFAP01135 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.86□□□□□ -2.11
TGFAP01135 AL358934.1-201ENST00000432346 324 ntBASIC1.86□□□□□ -2.11
TGFAP01135 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.86□□□□□ -2.11
TGFAP01135 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.86□□□□□ -2.11
TGFAP01135 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.86□□□□□ -2.11
TGFAP01135 RNU7-167P-201ENST00000459160 62 ntBASIC1.86□□□□□ -2.11
TGFAP01135 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.86□□□□□ -2.11
TGFAP01135 RNU6-991P-201ENST00000516168 107 ntBASIC1.86□□□□□ -2.11
TGFAP01135 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms