Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RNU6-36P-201ENST00000384172 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-4P-201ENST00000384205 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-5P-201ENST00000384238 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-3P-201ENST00000384314 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-16P-201ENST00000384385 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-15P-201ENST00000384534 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-2-201ENST00000384627 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-29P-201ENST00000384637 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-95P-201ENST00000384697 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-9-201ENST00000384776 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-33P-201ENST00000384793 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 SNORD73A-201ENST00000386062 65 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN1O95832 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.35□□□□□ -2.03
CLDN1O95832 AL645568.3-201ENST00000433683 316 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 AC093019.1-201ENST00000443135 252 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 AL353705.4-201ENST00000449661 238 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 AC133134.1-201ENST00000466800 359 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.35□□□□□ -2.03
CLDN1O95832 AC092436.3-201ENST00000511788 257 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNA5SP458-201ENST00000516188 119 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNA5SP76-201ENST00000516277 87 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 SNORA43.2-201ENST00000516652 128 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-1332P-201ENST00000516666 104 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.35□□□□□ -2.03
CLDN1O95832 HPRT1P3-201ENST00000539521 576 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 AC005668.1-201ENST00000571142 476 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RPS3AP23-202ENST00000574601 686 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 AC010620.2-201ENST00000600135 313 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RNU6-6P-201ENST00000606623 107 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 uc_338.15-201ENST00000615470 191 ntBASIC2.35□□□□□ -2.03
CLDN1O95832 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN1O95832 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN1O95832 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CLDN1O95832 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN1O95832 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN1O95832 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN1O95832 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
CLDN1O95832 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN1O95832 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN1O95832 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 Y_RNA.529-201ENST00000384586 119 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 RNU6-750P-201ENST00000390946 107 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 RPS29P13-201ENST00000402041 169 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AL078595.1-201ENST00000404458 226 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AL590004.2-201ENST00000404787 371 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN1O95832 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN1O95832 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN1O95832 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN1O95832 SEM1P1-201ENST00000506694 209 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 SNORA9.3-201ENST00000516383 129 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN1O95832 ELOCP31-201ENST00000540463 467 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN1O95832 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN1O95832 POLR3GP2-201ENST00000588366 668 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 VN1R107P-201ENST00000601784 209 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AC091152.3-201ENST00000604227 325 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AC019159.1-201ENST00000605094 187 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AC005046.1-201ENST00000608515 625 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AC064836.2-201ENST00000609491 462 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AC104237.2-201ENST00000612456 443 ntBASIC2.34□□□□□ -2.03
CLDN1O95832 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN1O95832 Y_RNA.4-201ENST00000362333 112 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 RNU6-797P-201ENST00000363101 109 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 RNU6-1180P-201ENST00000364935 107 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 RNU5E-7P-201ENST00000365290 117 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN1O95832 Y_RNA.509-201ENST00000384506 99 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN1O95832 AL139396.1-201ENST00000421137 167 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AL590632.1-201ENST00000424289 371 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN1O95832 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 GSTA11P-201ENST00000452866 669 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC092001.1-201ENST00000453012 261 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC006026.2-201ENST00000457376 180 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 snoU109.2-201ENST00000459316 135 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC130509.1-201ENST00000464158 433 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN1O95832 AC116655.1-201ENST00000508324 901 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC096745.1-201ENST00000509945 370 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 Y_RNA.682-201ENST00000516457 100 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 RNU6-826P-201ENST00000516827 104 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 CR383656.8-201ENST00000549046 145 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC026371.1-201ENST00000551867 419 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 IMMP1LP2-201ENST00000552954 492 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AL121821.2-201ENST00000556081 394 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC025281.1-201ENST00000567026 265 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 MIR4790-201ENST00000577799 79 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN1O95832 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.33□□□□□ -2.04
CLDN1O95832 AC009314.1-201ENST00000603871 304 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN1O95832 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.33□□□□□ -2.04
CLDN1O95832 AL353997.5-201ENST00000618886 171 ntBASIC2.33□□□□□ -2.04
CLDN1O95832 AC098657.3-201ENST00000620434 263 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms