Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 U4.7-201ENST00000638126 106 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AC068137.3-201ENST00000639191 341 ntBASIC2.76□□□□□ -1.97
DDX58O95786 AC073869.6-201ENST00000640656 341 ntBASIC2.76□□□□□ -1.97
DDX58O95786 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
DDX58O95786 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
DDX58O95786 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
DDX58O95786 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
DDX58O95786 AC002543.1-201ENST00000299783 1954 ntBASIC2.75□□□□□ -1.97
DDX58O95786 RNU4-20P-201ENST00000365601 151 ntBASIC2.75□□□□□ -1.97
DDX58O95786 RNU6-622P-201ENST00000384272 103 ntBASIC2.75□□□□□ -1.97
DDX58O95786 RN7SKP32-201ENST00000410167 303 ntBASIC2.75□□□□□ -1.97
DDX58O95786 SNORD56-201ENST00000413522 71 ntBASIC2.75□□□□□ -1.97
DDX58O95786 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX58O95786 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.75□□□□□ -1.97
DDX58O95786 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX58O95786 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.75□□□□□ -1.97
DDX58O95786 snoU13.26-201ENST00000459452 105 ntBASIC2.75□□□□□ -1.97
DDX58O95786 AP001025.1-201ENST00000486139 332 ntBASIC2.75□□□□□ -1.97
DDX58O95786 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX58O95786 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.75□□□□□ -1.97
DDX58O95786 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.75□□□□□ -1.97
DDX58O95786 CYCSP27-201ENST00000527643 293 ntBASIC2.75□□□□□ -1.97
DDX58O95786 AP000889.2-201ENST00000532684 490 ntBASIC2.75□□□□□ -1.97
DDX58O95786 CBX3P7-201ENST00000532876 502 ntBASIC2.75□□□□□ -1.97
DDX58O95786 AC087241.2-201ENST00000535801 324 ntBASIC2.75□□□□□ -1.97
DDX58O95786 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX58O95786 U4.5-201ENST00000617137 123 ntBASIC2.75□□□□□ -1.97
DDX58O95786 AC010297.1-201ENST00000623948 149 ntBASIC2.75□□□□□ -1.97
DDX58O95786 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.75□□□□□ -1.97
DDX58O95786 FER-210ENST00000628534 558 ntTSL 5 BASIC2.75□□□□□ -1.97
DDX58O95786 AC092881.1-201ENST00000638218 2733 ntBASIC2.75□□□□□ -1.97
DDX58O95786 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX58O95786 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX58O95786 RNU6-655P-201ENST00000362858 107 ntBASIC2.74□□□□□ -1.97
DDX58O95786 SNORA64-201ENST00000384674 134 ntBASIC2.74□□□□□ -1.97
DDX58O95786 MIR544A-201ENST00000384855 91 ntBASIC2.74□□□□□ -1.97
DDX58O95786 RNU6-192P-201ENST00000391253 100 ntBASIC2.74□□□□□ -1.97
DDX58O95786 RNU2-23P-201ENST00000410545 195 ntBASIC2.74□□□□□ -1.97
DDX58O95786 ARL5AP1-201ENST00000418991 388 ntBASIC2.74□□□□□ -1.97
DDX58O95786 AL139109.1-201ENST00000455491 297 ntBASIC2.74□□□□□ -1.97
DDX58O95786 AC087884.1-201ENST00000469738 328 ntBASIC2.74□□□□□ -1.97
DDX58O95786 AC008526.1-201ENST00000509149 338 ntBASIC2.74□□□□□ -1.97
DDX58O95786 HSPE1P18-201ENST00000517602 280 ntBASIC2.74□□□□□ -1.97
DDX58O95786 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.74□□□□□ -1.97
DDX58O95786 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.74□□□□□ -1.97
DDX58O95786 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.74□□□□□ -1.97
DDX58O95786 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.74□□□□□ -1.97
DDX58O95786 AC090115.3-201ENST00000553218 849 ntBASIC2.74□□□□□ -1.97
DDX58O95786 AL118558.2-201ENST00000556294 238 ntBASIC2.74□□□□□ -1.97
DDX58O95786 AC010525.2-201ENST00000590920 195 ntBASIC2.74□□□□□ -1.97
DDX58O95786 AC092807.2-201ENST00000609367 243 ntBASIC2.74□□□□□ -1.97
DDX58O95786 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
DDX58O95786 FO624990.1-201ENST00000636373 85 ntBASIC2.74□□□□□ -1.97
DDX58O95786 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
DDX58O95786 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
DDX58O95786 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX58O95786 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX58O95786 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
DDX58O95786 RNU6-529P-201ENST00000363383 104 ntBASIC2.73□□□□□ -1.97
DDX58O95786 RNU6-82P-201ENST00000363970 107 ntBASIC2.73□□□□□ -1.97
DDX58O95786 Y_RNA.373-201ENST00000365600 103 ntBASIC2.73□□□□□ -1.97
DDX58O95786 Y_RNA.573-201ENST00000384763 105 ntBASIC2.73□□□□□ -1.97
DDX58O95786 RNU6-1106P-201ENST00000390845 107 ntBASIC2.73□□□□□ -1.97
DDX58O95786 SNORD115-47-201ENST00000391226 86 ntBASIC2.73□□□□□ -1.97
DDX58O95786 RNU6-908P-201ENST00000410160 94 ntBASIC2.73□□□□□ -1.97
DDX58O95786 RNU4-26P-201ENST00000410270 107 ntBASIC2.73□□□□□ -1.97
DDX58O95786 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX58O95786 RPL39P29-201ENST00000447779 157 ntBASIC2.73□□□□□ -1.97
DDX58O95786 AC117503.1-201ENST00000472241 394 ntBASIC2.73□□□□□ -1.97
DDX58O95786 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.73□□□□□ -1.97
DDX58O95786 SNORA14.1-201ENST00000516113 141 ntBASIC2.73□□□□□ -1.97
DDX58O95786 RNU6-718P-201ENST00000516166 105 ntBASIC2.73□□□□□ -1.97
DDX58O95786 AC107304.1-201ENST00000604229 296 ntBASIC2.73□□□□□ -1.97
DDX58O95786 AL357078.3-201ENST00000607528 618 ntBASIC2.73□□□□□ -1.97
DDX58O95786 AC009233.1-201ENST00000616477 371 ntBASIC2.73□□□□□ -1.97
DDX58O95786 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.73□□□□□ -1.97
DDX58O95786 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
DDX58O95786 RNY4P14-201ENST00000363656 96 ntBASIC2.72□□□□□ -1.97
DDX58O95786 Y_RNA.231-201ENST00000364358 102 ntBASIC2.72□□□□□ -1.97
DDX58O95786 U3.13-201ENST00000364804 214 ntBASIC2.72□□□□□ -1.97
DDX58O95786 RNU6-1032P-201ENST00000384100 107 ntBASIC2.72□□□□□ -1.97
DDX58O95786 Y_RNA.450-201ENST00000384198 113 ntBASIC2.72□□□□□ -1.97
DDX58O95786 Y_RNA.453-201ENST00000384223 109 ntBASIC2.72□□□□□ -1.97
DDX58O95786 MIR548F1-201ENST00000408667 84 ntBASIC2.72□□□□□ -1.97
DDX58O95786 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX58O95786 AC008267.5-201ENST00000424928 265 ntBASIC2.72□□□□□ -1.97
DDX58O95786 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX58O95786 SNRPGP7-201ENST00000469016 106 ntBASIC2.72□□□□□ -1.97
DDX58O95786 AC092989.1-201ENST00000481235 277 ntBASIC2.72□□□□□ -1.97
DDX58O95786 Y_RNA.654-201ENST00000497848 106 ntBASIC2.72□□□□□ -1.97
DDX58O95786 AK3P2-201ENST00000507976 429 ntBASIC2.72□□□□□ -1.97
DDX58O95786 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX58O95786 AC107222.1-201ENST00000510899 637 ntBASIC2.72□□□□□ -1.97
DDX58O95786 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX58O95786 RNU6-586P-201ENST00000517265 104 ntBASIC2.72□□□□□ -1.97
DDX58O95786 RNU6-323P-201ENST00000521915 107 ntBASIC2.72□□□□□ -1.97
DDX58O95786 AC078814.3-201ENST00000553036 491 ntBASIC2.72□□□□□ -1.97
DDX58O95786 AL121757.2-201ENST00000611223 313 ntBASIC2.72□□□□□ -1.97
DDX58O95786 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
DDX58O95786 AC090517.2-201ENST00000614966 680 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms