Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RPS3AP17-201ENST00000472594 777 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RPL7P43-201ENST00000478876 753 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC105313.1-201ENST00000509121 353 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 RN7SKP219-201ENST00000516825 296 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNA5SP503-201ENST00000517047 117 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC015720.1-201ENST00000565251 277 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 MTCYBP33-201ENST00000575007 1130 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 MIR5583-1-201ENST00000580941 59 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC087045.1-201ENST00000605856 382 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC068792.1-201ENST00000621354 417 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CTDNEP1O95476 U6.114-201ENST00000636407 96 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 Y_RNA.318-201ENST00000365131 97 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 Y_RNA.409-201ENST00000383990 98 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 RNU6-259P-201ENST00000383999 107 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 Y_RNA.559-201ENST00000384686 107 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 RNU6-903P-201ENST00000391270 109 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 RNU2-63P-201ENST00000410792 194 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 RNU6-607P-201ENST00000411283 108 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 RPL31P63-201ENST00000422565 375 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 MTCYBP8-201ENST00000422855 651 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC073464.1-201ENST00000429823 534 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC002486.1-201ENST00000435098 391 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 AL353689.1-201ENST00000438895 199 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 FDX1P2-201ENST00000450769 375 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 HMGB1P29-201ENST00000505659 499 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 MTND3P5-201ENST00000512798 333 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 SNORA25.11-201ENST00000515935 105 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 Y_RNA.687-201ENST00000516558 91 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 RNU6-1178P-201ENST00000516674 107 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 MIR3126-201ENST00000577443 74 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CTDNEP1O95476 AL138963.2-201ENST00000605137 226 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 NDUFA8P1-201ENST00000605525 367 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC007684.1-201ENST00000609671 477 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 RMST_4.1-201ENST00000616886 107 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC138627.2-201ENST00000624202 601 ntBASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.69□□□□□ -2.14
CTDNEP1O95476 AC002543.1-201ENST00000299783 1954 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 Y_RNA.1-201ENST00000352915 104 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 RNU1-72P-201ENST00000362976 153 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 RNU6-45P-201ENST00000384471 107 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 RNU6-1127P-201ENST00000384580 107 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 MIR147B-201ENST00000390185 80 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 SNORA16.2-201ENST00000390991 127 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 RNU2-16P-201ENST00000410712 136 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 UBE2V1P10-201ENST00000414685 269 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.68□□□□□ -2.14
CTDNEP1O95476 EDDM3CP-201ENST00000415977 425 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.68□□□□□ -2.14
CTDNEP1O95476 AL356010.1-201ENST00000456364 102 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 AC022364.2-201ENST00000457963 554 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.68□□□□□ -2.14
CTDNEP1O95476 RPL22P13-201ENST00000493291 347 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.68□□□□□ -2.14
CTDNEP1O95476 AP003392.2-201ENST00000527269 208 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 MIR4299-201ENST00000577899 72 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 BNIP3P30-201ENST00000601184 574 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 AL355297.2-201ENST00000604792 129 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 AC008945.2-201ENST00000606056 604 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 AP001596.2-201ENST00000608410 312 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 AC104073.3-201ENST00000610942 955 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 U6.42-201ENST00000618440 107 ntBASIC1.68□□□□□ -2.14
CTDNEP1O95476 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
CTDNEP1O95476 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CTDNEP1O95476 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CTDNEP1O95476 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CTDNEP1O95476 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CTDNEP1O95476 RNU6-552P-201ENST00000362869 119 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 RNU6-1159P-201ENST00000362933 107 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 Y_RNA.296-201ENST00000364930 108 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 RNU5A-6P-201ENST00000384136 116 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 RNU6-748P-201ENST00000384648 107 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 RNU6-174P-201ENST00000410406 106 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 RNU4-55P-201ENST00000410731 137 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 RPS20P15-201ENST00000412792 311 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.67□□□□□ -2.14
CTDNEP1O95476 AC073415.1-201ENST00000449240 153 ntBASIC1.67□□□□□ -2.14
CTDNEP1O95476 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.67□□□□□ -2.14
CTDNEP1O95476 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.67□□□□□ -2.14
CTDNEP1O95476 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.67□□□□□ -2.14
CTDNEP1O95476 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms