Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
LMX1BO60663 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LMX1BO60663 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.57□□□□□ -2
LMX1BO60663 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
LMX1BO60663 AC233263.6-201ENST00000631132 1963 ntBASIC2.56□□□□□ -2
LMX1BO60663 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LMX1BO60663 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LMX1BO60663 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.56□□□□□ -2
LMX1BO60663 FAM35CP-201ENST00000554755 2470 ntBASIC2.56□□□□□ -2
LMX1BO60663 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.56□□□□□ -2
LMX1BO60663 Y_RNA.153-201ENST00000363615 91 ntBASIC2.56□□□□□ -2
LMX1BO60663 RNA5SP126-201ENST00000365092 109 ntBASIC2.56□□□□□ -2
LMX1BO60663 AC117470.1-201ENST00000381974 330 ntBASIC2.56□□□□□ -2
LMX1BO60663 RNU6-26P-201ENST00000383985 107 ntBASIC2.56□□□□□ -2
LMX1BO60663 RNU6-72P-201ENST00000384285 79 ntBASIC2.56□□□□□ -2
LMX1BO60663 AL513475.1-201ENST00000406602 315 ntBASIC2.56□□□□□ -2
LMX1BO60663 RNA5SP129-201ENST00000410276 118 ntBASIC2.56□□□□□ -2
LMX1BO60663 RN7SKP58-201ENST00000411010 305 ntBASIC2.56□□□□□ -2
LMX1BO60663 AL451074.5-201ENST00000415894 435 ntBASIC2.56□□□□□ -2
LMX1BO60663 AC007560.1-201ENST00000426912 237 ntBASIC2.56□□□□□ -2
LMX1BO60663 AL512844.2-201ENST00000433990 593 ntBASIC2.56□□□□□ -2
LMX1BO60663 SNRPEP4-201ENST00000435815 279 ntBASIC2.56□□□□□ -2
LMX1BO60663 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.56□□□□□ -2
LMX1BO60663 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.56□□□□□ -2
LMX1BO60663 AL031274.1-201ENST00000450334 232 ntBASIC2.56□□□□□ -2
LMX1BO60663 MTATP8P1-201ENST00000467115 207 ntBASIC2.56□□□□□ -2
LMX1BO60663 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.56□□□□□ -2
LMX1BO60663 AC116655.1-201ENST00000508324 901 ntBASIC2.56□□□□□ -2
LMX1BO60663 RNA5SP356-201ENST00000515972 94 ntBASIC2.56□□□□□ -2
LMX1BO60663 RNU6-1183P-201ENST00000517054 60 ntBASIC2.56□□□□□ -2
LMX1BO60663 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.56□□□□□ -2
LMX1BO60663 GTF3AP2-201ENST00000557014 266 ntBASIC2.56□□□□□ -2
LMX1BO60663 AC010653.1-201ENST00000571108 881 ntBASIC2.56□□□□□ -2
LMX1BO60663 AL133393.1-201ENST00000603277 287 ntBASIC2.56□□□□□ -2
LMX1BO60663 AC092447.9-201ENST00000603395 144 ntBASIC2.56□□□□□ -2
LMX1BO60663 AP000787.2-201ENST00000604432 568 ntBASIC2.56□□□□□ -2
LMX1BO60663 AL078596.1-201ENST00000624856 447 ntBASIC2.56□□□□□ -2
LMX1BO60663 AC138305.3-201ENST00000624988 240 ntBASIC2.56□□□□□ -2
LMX1BO60663 U4.7-201ENST00000638126 106 ntBASIC2.56□□□□□ -2
LMX1BO60663 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LMX1BO60663 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
LMX1BO60663 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.56□□□□□ -2
LMX1BO60663 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LMX1BO60663 SNORD50.1-201ENST00000362987 71 ntBASIC2.55□□□□□ -2
LMX1BO60663 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LMX1BO60663 Y_RNA.428-201ENST00000384078 102 ntBASIC2.55□□□□□ -2
LMX1BO60663 RNU6-790P-201ENST00000384479 105 ntBASIC2.55□□□□□ -2
LMX1BO60663 RNU6-1106P-201ENST00000390845 107 ntBASIC2.55□□□□□ -2
LMX1BO60663 RPS29P13-201ENST00000402041 169 ntBASIC2.55□□□□□ -2
LMX1BO60663 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.55□□□□□ -2
LMX1BO60663 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.55□□□□□ -2
LMX1BO60663 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.55□□□□□ -2
LMX1BO60663 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.55□□□□□ -2
LMX1BO60663 AC091812.1-201ENST00000432235 1948 ntBASIC2.55□□□□□ -2
LMX1BO60663 SSXP4-201ENST00000451349 245 ntBASIC2.55□□□□□ -2
LMX1BO60663 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.55□□□□□ -2
LMX1BO60663 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.55□□□□□ -2
LMX1BO60663 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.55□□□□□ -2
LMX1BO60663 U8.20-201ENST00000459445 131 ntBASIC2.55□□□□□ -2
LMX1BO60663 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.55□□□□□ -2
LMX1BO60663 AC105758.1-201ENST00000506038 399 ntBASIC2.55□□□□□ -2
LMX1BO60663 RNU6-764P-201ENST00000516396 105 ntBASIC2.55□□□□□ -2
LMX1BO60663 RNA5SP367-201ENST00000516557 118 ntBASIC2.55□□□□□ -2
LMX1BO60663 SNORD116.3-201ENST00000517176 78 ntBASIC2.55□□□□□ -2
LMX1BO60663 COX6CP5-201ENST00000527162 228 ntBASIC2.55□□□□□ -2
LMX1BO60663 AL355596.1-201ENST00000565399 3996 ntBASIC2.55□□□□□ -2
LMX1BO60663 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.55□□□□□ -2
LMX1BO60663 MIR5696-201ENST00000578474 85 ntBASIC2.55□□□□□ -2
LMX1BO60663 MIR3162-201ENST00000581818 82 ntBASIC2.55□□□□□ -2
LMX1BO60663 MIR4503-201ENST00000582187 83 ntBASIC2.55□□□□□ -2
LMX1BO60663 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
LMX1BO60663 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.55□□□□□ -2
LMX1BO60663 AC008121.1-201ENST00000603244 268 ntBASIC2.55□□□□□ -2
LMX1BO60663 AC027309.3-201ENST00000623419 351 ntBASIC2.55□□□□□ -2
LMX1BO60663 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LMX1BO60663 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
LMX1BO60663 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.55□□□□□ -2
LMX1BO60663 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.55□□□□□ -2
LMX1BO60663 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.54□□□□□ -2
LMX1BO60663 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LMX1BO60663 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.54□□□□□ -2
LMX1BO60663 AL161431.1-201ENST00000618966 4205 ntBASIC2.54□□□□□ -2
LMX1BO60663 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LMX1BO60663 RNU1-35P-201ENST00000362782 153 ntBASIC2.54□□□□□ -2
LMX1BO60663 RNU6-942P-201ENST00000363002 107 ntBASIC2.54□□□□□ -2
LMX1BO60663 RNU6-99P-201ENST00000364721 107 ntBASIC2.54□□□□□ -2
LMX1BO60663 SNORA51.4-201ENST00000364993 124 ntBASIC2.54□□□□□ -2
LMX1BO60663 Y_RNA.533-201ENST00000384596 114 ntBASIC2.54□□□□□ -2
LMX1BO60663 AL591034.2-201ENST00000402839 359 ntBASIC2.54□□□□□ -2
LMX1BO60663 RNU2-23P-201ENST00000410545 195 ntBASIC2.54□□□□□ -2
LMX1BO60663 NUP35P1-201ENST00000422734 947 ntBASIC2.54□□□□□ -2
LMX1BO60663 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.54□□□□□ -2
LMX1BO60663 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.54□□□□□ -2
LMX1BO60663 AC112492.4-201ENST00000456549 352 ntBASIC2.54□□□□□ -2
LMX1BO60663 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.54□□□□□ -2
LMX1BO60663 RPL17P19-201ENST00000489069 552 ntBASIC2.54□□□□□ -2
LMX1BO60663 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.54□□□□□ -2
LMX1BO60663 AC091826.1-201ENST00000514065 313 ntBASIC2.54□□□□□ -2
LMX1BO60663 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.54□□□□□ -2
LMX1BO60663 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms